Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198747

Identifier: 87198747

GI number: 87198747

Start: 762499

End: 763257

Strand: Reverse

Name: 87198747

Synonym: Saro_0723

Alternate gene names: NA

Gene position: 763257-762499 (Counterclockwise)

Preceding gene: 87198748

Following gene: 87198746

Centisome position: 21.43

GC content: 59.55

Gene sequence:

>759_bases
ATGAACGAATTCGCAGACCTGTTCCTGCCTGATGCCGAAGGCGCCACTTCGCCGGACTACTATGACTTCGGCTGCAGTTC
AGGCGGGAACCTGGCGTTCATCGCCGGATTCCTGCCCGAACTGAAGGGTGTCGGCATAGATATAAACGAGGCCAAGGTCG
CACTCGCCCAAAATCGCGGGCAAGAGGCGATCGTCCGCGACATCCTGAAGATGCCGGAAAGCAAGCAGGTGGATTTCGTC
ACCATGGCGCATTTCCTTGAGCACCTGCTTTCCACGCAGGCCGCCGGCATGTTCCTTCGCAAGGCGGCTCGCATCGCGCG
ATCCTTCGTCCACGTCCGCCAGCCCTGGTTCGATGCCGATGGCTATCTGCTGTCGAAGGGGTTGAAATTCTATTGGTCCG
ACTGGCGAGGCCACCGCAATGCGATGACATCGCTCGACTTTCACAAGATTTGCCGTGACCTGCTGGCGAAAGGCGAAATC
GCCTCGTTCGGCATCTACGGACGCGGTCCGATTGCGGATTCCGAAAGTGAGATGGTGATACCCGTCGATGCGCCATTCGA
CAGCCAGAAATACGTTGAAACGCTGGGCCCCAAGCCGGCGGTCGGCTTCGAAATACCTGTTTTTGCAGAGATCCTCGTGG
ATATCGCCGTCGTCCGGGGGGCCGAAAGCGACGCCAATCGGCGCGCGCTCCTGCGACGGCTCGACATGAAATTGCCGGTC
GTGCCGATCATCGAAAGCGCCGGGCATTGCTGGCCGTGA

Upstream 100 bases:

>100_bases
TCGCTCGCGCGGTTCGCTCCATGCAGCAGAACCCGCACCTGGGCCGCCTGCGCACTGCCGCGGCCCGCCTGTTCGCCGTC
ACCACACCGGAGACACCTGC

Downstream 100 bases:

>100_bases
CGGCTGCCCGGCAACCCGCAGGCCCTGGCCGCATCCGCGCTTGGCTCGCGGGCATCCCGCTCAGGCATCGATGGTTCGCT
TTACTGGTCGCGGTGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRGQEAIVRDILKMPESKQVDFV
TMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDADGYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEI
ASFGIYGRGPIADSESEMVIPVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV
VPIIESAGHCWP

Sequences:

>Translated_252_residues
MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRGQEAIVRDILKMPESKQVDFV
TMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDADGYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEI
ASFGIYGRGPIADSESEMVIPVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV
VPIIESAGHCWP
>Mature_252_residues
MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRGQEAIVRDILKMPESKQVDFV
TMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDADGYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEI
ASFGIYGRGPIADSESEMVIPVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV
VPIIESAGHCWP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27891; Mature: 27891

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRG
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHCCC
QEAIVRDILKMPESKQVDFVTMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDAD
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEIASFGIYGRGPIADSESEMVI
CHHHHHCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEE
PVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV
EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
VPIIESAGHCWP
HHHHHCCCCCCC
>Mature Secondary Structure
MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRG
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHCCC
QEAIVRDILKMPESKQVDFVTMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDAD
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEIASFGIYGRGPIADSESEMVI
CHHHHHCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEE
PVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV
EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
VPIIESAGHCWP
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA