| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198724
Identifier: 87198724
GI number: 87198724
Start: 739170
End: 740105
Strand: Reverse
Name: 87198724
Synonym: Saro_0700
Alternate gene names: NA
Gene position: 740105-739170 (Counterclockwise)
Preceding gene: 87198725
Following gene: 87198723
Centisome position: 20.78
GC content: 68.91
Gene sequence:
>936_bases ATGAGCGGTCTTCCCGCAATTGTGGACGGCCTGCGCGGCGATTGGCGCGACCGGGCAAGCGCGGAAAACCGCCTCCTTCC GCAAAGCCGGATTTCCGGCCCGATGCCGTGGGTCATCGGCATAATGATCGGCCTCACCGTGGTCGCCACCGCAAGCGGCC TCGCTCTGCGGAACACGGCGCGTGCAGCCAGTGCCGACGTCTCGGGTGGGGTCACTGTACAGATCGTTCACGGCGCCCCG GCAGAGCGCGACCGCCAGGCTCGCGCTGCGTTGGGCGTGCTGGGAAAGACACCCGGCGTCGGCTCTGTCCGCCTCGTCCC GCAGCAGGAACTGGATGCACTGGTCGAGCCCTGGCTCGGAACCAGGGCCGGCGACGATGTCAACGACCTGCCCGTCCCCG CGCTCATCGACCTGCGACTTGAAGGCAATGCCGATCCGGCGCGCGTCGAAGCCCTGCGCGCGCGCCTTCGCCCGGTTGCC CCCGCCGCCAGGGTGGATGCGCAGGCAAGCTGGCTGGCCCCCGTGTTCGAAGCCATCGCCGCCCTGCAATGGCTGGCGGG AGGGCTTATCGCACTGCTCGCATTCGCGACCATCGCCACCGTGCTGCTCGCCTCGCGCAATGCCCTTGGAAACCACCGCA GCACGATCGAGATCGTCCACATGCTTGGCGCAACGGATGCCCAGATCGCCCGCATCTTCCAGCGGTCGATGGCCGTGGAT GCGGCTGCGGGCGGCATCGGCGGGTTGCTGCTCGGCGTCGCGGTCACCGGGCTGCTGGGAAGCCAGTTCGCCGCCCTTGG TTCCGGCATGATGACTGCGGGCGGCCTCGGGGCACTCGACTGGCTGACGATCTGCTGCATCCCGGTCGGCGGCGTCCTGC TTGCGGTGCTTACTGCGCGCCTGTCCGTGCTCGGCGCGCTAAGGCGCATGTTATGA
Upstream 100 bases:
>100_bases AGGGACGCCTGTTCGACCCGACCGGCGCGCTGCGCTATCCGCCCCGGCGCAGCGCCGCCTCGCCCCGCCCGGAAATGGCG CAGCCCGGTGTTCTGGGCGC
Downstream 100 bases:
>100_bases CCCGGCACGGCATCTTCCGGCGACTCCTGTCGCTGCTTATGATCGCCTGGGCGCTCGGCTTCATCTGGTTCGCCGTGTTC CTTCCGCGCCCTGCGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSGLPAIVDGLRGDWRDRASAENRLLPQSRISGPMPWVIGIMIGLTVVATASGLALRNTARAASADVSGGVTVQIVHGAP AERDRQARAALGVLGKTPGVGSVRLVPQQELDALVEPWLGTRAGDDVNDLPVPALIDLRLEGNADPARVEALRARLRPVA PAARVDAQASWLAPVFEAIAALQWLAGGLIALLAFATIATVLLASRNALGNHRSTIEIVHMLGATDAQIARIFQRSMAVD AAAGGIGGLLLGVAVTGLLGSQFAALGSGMMTAGGLGALDWLTICCIPVGGVLLAVLTARLSVLGALRRML
Sequences:
>Translated_311_residues MSGLPAIVDGLRGDWRDRASAENRLLPQSRISGPMPWVIGIMIGLTVVATASGLALRNTARAASADVSGGVTVQIVHGAP AERDRQARAALGVLGKTPGVGSVRLVPQQELDALVEPWLGTRAGDDVNDLPVPALIDLRLEGNADPARVEALRARLRPVA PAARVDAQASWLAPVFEAIAALQWLAGGLIALLAFATIATVLLASRNALGNHRSTIEIVHMLGATDAQIARIFQRSMAVD AAAGGIGGLLLGVAVTGLLGSQFAALGSGMMTAGGLGALDWLTICCIPVGGVLLAVLTARLSVLGALRRML >Mature_310_residues SGLPAIVDGLRGDWRDRASAENRLLPQSRISGPMPWVIGIMIGLTVVATASGLALRNTARAASADVSGGVTVQIVHGAPA ERDRQARAALGVLGKTPGVGSVRLVPQQELDALVEPWLGTRAGDDVNDLPVPALIDLRLEGNADPARVEALRARLRPVAP AARVDAQASWLAPVFEAIAALQWLAGGLIALLAFATIATVLLASRNALGNHRSTIEIVHMLGATDAQIARIFQRSMAVDA AAGGIGGLLLGVAVTGLLGSQFAALGSGMMTAGGLGALDWLTICCIPVGGVLLAVLTARLSVLGALRRML
Specific function: Unknown
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31941; Mature: 31810
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLPAIVDGLRGDWRDRASAENRLLPQSRISGPMPWVIGIMIGLTVVATASGLALRNTA CCCCHHHHHHHCCCHHHHHCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH RAASADVSGGVTVQIVHGAPAERDRQARAALGVLGKTPGVGSVRLVPQQELDALVEPWLG HHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHC TRAGDDVNDLPVPALIDLRLEGNADPARVEALRARLRPVAPAARVDAQASWLAPVFEAIA CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHH ALQWLAGGLIALLAFATIATVLLASRNALGNHRSTIEIVHMLGATDAQIARIFQRSMAVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAAGGIGGLLLGVAVTGLLGSQFAALGSGMMTAGGLGALDWLTICCIPVGGVLLAVLTAR HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSVLGALRRML HHHHHHHHHHC >Mature Secondary Structure SGLPAIVDGLRGDWRDRASAENRLLPQSRISGPMPWVIGIMIGLTVVATASGLALRNTA CCCHHHHHHHCCCHHHHHCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH RAASADVSGGVTVQIVHGAPAERDRQARAALGVLGKTPGVGSVRLVPQQELDALVEPWLG HHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHC TRAGDDVNDLPVPALIDLRLEGNADPARVEALRARLRPVAPAARVDAQASWLAPVFEAIA CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHH ALQWLAGGLIALLAFATIATVLLASRNALGNHRSTIEIVHMLGATDAQIARIFQRSMAVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAAGGIGGLLLGVAVTGLLGSQFAALGSGMMTAGGLGALDWLTICCIPVGGVLLAVLTAR HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSVLGALRRML HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA