Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198647

Identifier: 87198647

GI number: 87198647

Start: 668987

End: 669502

Strand: Reverse

Name: 87198647

Synonym: Saro_0623

Alternate gene names: NA

Gene position: 669502-668987 (Counterclockwise)

Preceding gene: 87198648

Following gene: 87198646

Centisome position: 18.8

GC content: 60.85

Gene sequence:

>516_bases
ATGTCATATGCACGCATAGACCACGCCGCATGGGTCGAGGACAACAACCGCGGCTATAACCAGATGTACGCCAAGCGCCG
CTCATGGAAGCCAGCGCCCGAGAAGCTGACCGACTTCCAGGCTAAGGTCATGGATATCTGCGGAATGGTTGGTGGCGGGA
TCTACAACGCCCCGATCAACTGGGAAAAGGTATCGTGGGGCGTGGGCCACAATCACTCGGGCATATTCGTCCCGTGGAGA
GATGGCCGCATGTCCACCTTCGACTTCTATCCGCTGACGTTGCTGGTGCTGCTCTGCCATGAAGCGCGCATCCGCTGCGA
GATCCGCGCCAAGTCAGCAGGTCACTTCGAGCTGTCGTTTTTCCAGCGCAGCCACGAAGGCGGCATGGCACTTCGGCACC
CCAACATTGACGAAGCCGTCGCAGTCTTCCGCGAATACCTGCCGGACGATCACCGCATCCGCTACCGGTTGCCCGAGGTG
CAATCCGAGCCAGCGCTCGCCGTGGCGGAGGGCTGA

Upstream 100 bases:

>100_bases
GTGGGAATGGAAGCCCAGCGATCGGCGCCGCAACCTGGTGAAAGCCGCTGCGCTCATCCTCGCCGAGATCGAACGTCTCG
ACCGCAAGGAGGGCTGAGCG

Downstream 100 bases:

>100_bases
GCGATGGCTGACAAGGGCATCATCTTCTCGGATGCTATGGTGCGCGCCCTGCTGGACGGCACAAAGACACAGACCCGGCG
CCTGTGCGCATGGCCCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSYARIDHAAWVEDNNRGYNQMYAKRRSWKPAPEKLTDFQAKVMDICGMVGGGIYNAPINWEKVSWGVGHNHSGIFVPWR
DGRMSTFDFYPLTLLVLLCHEARIRCEIRAKSAGHFELSFFQRSHEGGMALRHPNIDEAVAVFREYLPDDHRIRYRLPEV
QSEPALAVAEG

Sequences:

>Translated_171_residues
MSYARIDHAAWVEDNNRGYNQMYAKRRSWKPAPEKLTDFQAKVMDICGMVGGGIYNAPINWEKVSWGVGHNHSGIFVPWR
DGRMSTFDFYPLTLLVLLCHEARIRCEIRAKSAGHFELSFFQRSHEGGMALRHPNIDEAVAVFREYLPDDHRIRYRLPEV
QSEPALAVAEG
>Mature_170_residues
SYARIDHAAWVEDNNRGYNQMYAKRRSWKPAPEKLTDFQAKVMDICGMVGGGIYNAPINWEKVSWGVGHNHSGIFVPWRD
GRMSTFDFYPLTLLVLLCHEARIRCEIRAKSAGHFELSFFQRSHEGGMALRHPNIDEAVAVFREYLPDDHRIRYRLPEVQ
SEPALAVAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19665; Mature: 19533

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYARIDHAAWVEDNNRGYNQMYAKRRSWKPAPEKLTDFQAKVMDICGMVGGGIYNAPIN
CCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCC
WEKVSWGVGHNHSGIFVPWRDGRMSTFDFYPLTLLVLLCHEARIRCEIRAKSAGHFELSF
CEEEEECCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEE
FQRSHEGGMALRHPNIDEAVAVFREYLPDDHRIRYRLPEVQSEPALAVAEG
EECCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECC
>Mature Secondary Structure 
SYARIDHAAWVEDNNRGYNQMYAKRRSWKPAPEKLTDFQAKVMDICGMVGGGIYNAPIN
CCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCC
WEKVSWGVGHNHSGIFVPWRDGRMSTFDFYPLTLLVLLCHEARIRCEIRAKSAGHFELSF
CEEEEECCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEE
FQRSHEGGMALRHPNIDEAVAVFREYLPDDHRIRYRLPEVQSEPALAVAEG
EECCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA