| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198553
Identifier: 87198553
GI number: 87198553
Start: 572780
End: 573094
Strand: Reverse
Name: 87198553
Synonym: Saro_0529
Alternate gene names: NA
Gene position: 573094-572780 (Counterclockwise)
Preceding gene: 87198555
Following gene: 87198549
Centisome position: 16.09
GC content: 56.51
Gene sequence:
>315_bases ATGTTGTATTTCCTTGCCACGGCTATAGGCGGCCGTGATCTGCGAAATAAAACTGCGCGCGGCCAAGGTCGCCCTGAACT ACTTGAGAACGGGAGTGTCCCGACGGCGCGTAAGCATGTTCAGGTGCTCAAGCGCGTCATTCAGGTGAATTCCAACAATG CCGAGACCAAGGTTGTCAGCCACGTCCAACGCTCTCGCAACGGTCTCGCGCAATGCGTCCAGCTGCTCCAATGCCGGGCG ACGGCAATCCTGGTCATCTTTCATTACGATCTCCCTCCCACCCTGAGTCGCCTGACCTTCGCAAAAAATCCGTGA
Upstream 100 bases:
>100_bases ACGCGGAGCCTGAGACGTTGACCTGCAGCATGGGCACATCGCACTTCGACATGATGCCGCCCTGCAAGCAGGTAGTCGGC GTGGTACGCCTTCGAGCCGT
Downstream 100 bases:
>100_bases TCTCGCGCGCTGTGACCTGTACCTACCGCGTAGGCCCGCCACGAACCAGACGTGAGCCTCCTATTCCGTCAGCAGTCTCC GTCTGCTTCAGTTTGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MLYFLATAIGGRDLRNKTARGQGRPELLENGSVPTARKHVQVLKRVIQVNSNNAETKVVSHVQRSRNGLAQCVQLLQCRA TAILVIFHYDLPPTLSRLTFAKNP
Sequences:
>Translated_104_residues MLYFLATAIGGRDLRNKTARGQGRPELLENGSVPTARKHVQVLKRVIQVNSNNAETKVVSHVQRSRNGLAQCVQLLQCRA TAILVIFHYDLPPTLSRLTFAKNP >Mature_104_residues MLYFLATAIGGRDLRNKTARGQGRPELLENGSVPTARKHVQVLKRVIQVNSNNAETKVVSHVQRSRNGLAQCVQLLQCRA TAILVIFHYDLPPTLSRLTFAKNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11577; Mature: 11577
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYFLATAIGGRDLRNKTARGQGRPELLENGSVPTARKHVQVLKRVIQVNSNNAETKVVS CEEEEEEHHCCCHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH HVQRSRNGLAQCVQLLQCRATAILVIFHYDLPPTLSRLTFAKNP HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCC >Mature Secondary Structure MLYFLATAIGGRDLRNKTARGQGRPELLENGSVPTARKHVQVLKRVIQVNSNNAETKVVS CEEEEEEHHCCCHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH HVQRSRNGLAQCVQLLQCRATAILVIFHYDLPPTLSRLTFAKNP HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA