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The map label for this gene is kstR2 [H]

Identifier: 87198540

GI number: 87198540

Start: 557175

End: 557762

Strand: Reverse

Name: kstR2 [H]

Synonym: Saro_0516

Alternate gene names: 87198540

Gene position: 557762-557175 (Counterclockwise)

Preceding gene: 87198541

Following gene: 87198536

Centisome position: 15.66

GC content: 61.9

Gene sequence:

>588_bases
ATGGCACAAGTAGAAAACGGCAAGACGCGCATTCTTGACTCGGCTGCGACGGCTCTTCGCCAGAAGGGCCTCGCCGGCGC
GAAACTTACCGAGATTGCAGCGGGTGCCGGCATGCTTGCCCCCAGCATCTACCACCATTTCTCCTCGAAGGATGATCTCG
TCGAGGCCGTGATGATGGAGGGCATCTACCGCAACAACCGCCACATCATGGCCCAGGTCGAAGTCCTTGGGCCTTCTGCG
ACCGCGTTGGAGCGATTAAAGGCGGCGATCGAGGCGCACATCGGGTTTCTGCTGACAGGCGACGACTATTCATCCGCCGT
CTCGCGCGTCTTCGATGACCTTCCCGCCGAGATGAAGGGGCGGGTTCTGGCGGCCTACTCCAGCTTCGACAATTACTGGC
GCGATCTCATCGCCGCCGCCCAGGCCGATGGCTCGGCTCGAAGCGGTCTCGATCCGACTCTCGTCCGCAAGTTCCTGATC
GCCATGCTTGATTCATGCGCCACATGGTACCGCCCCGGCAAGCTCAGCCCGGCGCAGATCGCCGAACAGGCCGCCAATCT
TGCCCTGCACGGTTTTGCGAAGGGCTAG

Upstream 100 bases:

>100_bases
TTCTTGATCCTCCTGCCGCTGGCGTGCCAAACGTGCCATTTGCAGGTTGATTGCAAAGCGCTGGTGCATCAGTTGTGCCT
GAGACAGATGAAGATTGATT

Downstream 100 bases:

>100_bases
GCCGTAAACTTGCCGTAACTGCCCTTGTGGAACAGCAACGGATCGCCCGGCGTGGCGATCTCGAAGCTCTCGACCGCACC
CAGCACCAGCAGATGGTCCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MAQVENGKTRILDSAATALRQKGLAGAKLTEIAAGAGMLAPSIYHHFSSKDDLVEAVMMEGIYRNNRHIMAQVEVLGPSA
TALERLKAAIEAHIGFLLTGDDYSSAVSRVFDDLPAEMKGRVLAAYSSFDNYWRDLIAAAQADGSARSGLDPTLVRKFLI
AMLDSCATWYRPGKLSPAQIAEQAANLALHGFAKG

Sequences:

>Translated_195_residues
MAQVENGKTRILDSAATALRQKGLAGAKLTEIAAGAGMLAPSIYHHFSSKDDLVEAVMMEGIYRNNRHIMAQVEVLGPSA
TALERLKAAIEAHIGFLLTGDDYSSAVSRVFDDLPAEMKGRVLAAYSSFDNYWRDLIAAAQADGSARSGLDPTLVRKFLI
AMLDSCATWYRPGKLSPAQIAEQAANLALHGFAKG
>Mature_194_residues
AQVENGKTRILDSAATALRQKGLAGAKLTEIAAGAGMLAPSIYHHFSSKDDLVEAVMMEGIYRNNRHIMAQVEVLGPSAT
ALERLKAAIEAHIGFLLTGDDYSSAVSRVFDDLPAEMKGRVLAAYSSFDNYWRDLIAAAQADGSARSGLDPTLVRKFLIA
MLDSCATWYRPGKLSPAQIAEQAANLALHGFAKG

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 20896; Mature: 20765

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVENGKTRILDSAATALRQKGLAGAKLTEIAAGAGMLAPSIYHHFSSKDDLVEAVMME
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH
GIYRNNRHIMAQVEVLGPSATALERLKAAIEAHIGFLLTGDDYSSAVSRVFDDLPAEMKG
HHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHCCHHHCC
RVLAAYSSFDNYWRDLIAAAQADGSARSGLDPTLVRKFLIAMLDSCATWYRPGKLSPAQI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AEQAANLALHGFAKG
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
AQVENGKTRILDSAATALRQKGLAGAKLTEIAAGAGMLAPSIYHHFSSKDDLVEAVMME
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH
GIYRNNRHIMAQVEVLGPSATALERLKAAIEAHIGFLLTGDDYSSAVSRVFDDLPAEMKG
HHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHCCHHHCC
RVLAAYSSFDNYWRDLIAAAQADGSARSGLDPTLVRKFLIAMLDSCATWYRPGKLSPAQI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AEQAANLALHGFAKG
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA