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The map label for this gene is 87198232

Identifier: 87198232

GI number: 87198232

Start: 213426

End: 213617

Strand: Direct

Name: 87198232

Synonym: Saro_0207

Alternate gene names: NA

Gene position: 213426-213617 (Clockwise)

Preceding gene: 87198231

Following gene: 87198233

Centisome position: 5.99

GC content: 63.54

Gene sequence:

>192_bases
GTGAAGAACCGCCTCAAGGTCCTGCGGGCGGAGCGGAACTGGAGCCAGGCCGACCTTGCTGAAAGGCTGGAGGTAAGCCG
CCAGTCGGTCAACGCGATAGAGACGGGAAAGTACGATCCGTCGCTCCCCCTCGCCTTTCGCATCGCCGACCTGTTCGGCC
TCGCCATCGAGGAGATCTTCGAGCGCGACTGA

Upstream 100 bases:

>100_bases
TGCCGCATGTCCCGGCCTTCTATGCCGCCGTCCTGTGGTTCGCCGGGCTCGGTCTCGGCGGCTGCGTCAACGCGGTTCTC
GAACGCAGCGGGGGGGCGGA

Downstream 100 bases:

>100_bases
TCGATGTGCTTGCGGGCCGGGATGCGGCGCGCCATGAACGGGGCCATGTCCGACGTCTCGCGCTTCACCCTGCCTTCGGG
TCTCGCCATGGCCTATCGTC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MKNRLKVLRAERNWSQADLAERLEVSRQSVNAIETGKYDPSLPLAFRIADLFGLAIEEIFERD

Sequences:

>Translated_63_residues
MKNRLKVLRAERNWSQADLAERLEVSRQSVNAIETGKYDPSLPLAFRIADLFGLAIEEIFERD
>Mature_63_residues
MKNRLKVLRAERNWSQADLAERLEVSRQSVNAIETGKYDPSLPLAFRIADLFGLAIEEIFERD

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7291; Mature: 7291

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRLKVLRAERNWSQADLAERLEVSRQSVNAIETGKYDPSLPLAFRIADLFGLAIEEIF
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
ERD
CCC
>Mature Secondary Structure
MKNRLKVLRAERNWSQADLAERLEVSRQSVNAIETGKYDPSLPLAFRIADLFGLAIEEIF
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
ERD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]