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The map label for this gene is 87198205

Identifier: 87198205

GI number: 87198205

Start: 183684

End: 184328

Strand: Direct

Name: 87198205

Synonym: Saro_0179

Alternate gene names: NA

Gene position: 183684-184328 (Clockwise)

Preceding gene: 87198204

Following gene: 87198207

Centisome position: 5.16

GC content: 65.74

Gene sequence:

>645_bases
GTGTCCAAGGCCTCGCAGGAAGCCTATCGCAAGATTCGCGCCGGCATCCTGTCGGGGCATTTCCCCGCCGGGCAGTTCGT
GCCCGAGGACGAATTCGCGCAATTCTGCGGCCTTTCGCGCACCCCCGTTCGCGAAGCCATCGCGGAACTGGTTTCGGAAA
TGCTGCTCCAGCGCTCGGACACCAACCGCGTCTTCGTGCCGGTCTGGTCGGACGACGACGAGGAGGAGCTGTTCGCGCTG
CGGGCCATGCTCGAAAGCCACTGCGCGACCCGTGCGGCGCGTTTCATCACCGATGAGCAGATCGACGAACTTCGCGCGCA
TTGCGATTTCATCGACCGCGCGATCTCGCAGTCGGACGGACCGGACGTGTCCGGCTTTGTCGAGGGCAACCGCCGGTTCC
ACGCAGTGATTCTCGCCGCGGCGCAGTCCGAACGGCTGGGGCAACTGTTGCGGTTCGTGGTCAGCCAGATCGTCGTCCAC
CGCACGGCGGAGCAATATACCCGCGCCGACATGGAGCAGAGCCAGCGCGACCATCGCGACCTCGTCAGCGCATTCGCCAT
GCGCGACGAGATCTGGGCCGGAGCGATCGCCAACACGCACATCAGGCGCGCGGCGAACGCCTACCGGACCATGCGTCAGG
GCTGA

Upstream 100 bases:

>100_bases
CGCGCGCCGCCTGATCGGGGTGGAAGTCGGCGCTTCGTTCTGACAAGGCGGCAAGCCGGGCGGGCGGATCGACCGCCCCC
CGGCAAGCTCAGGAGTTCAT

Downstream 100 bases:

>100_bases
ACGCCCGGCGTCAGGACTGGACTACCCGGAGCTGCGCTTCGGGAAGCGCTTCCGCCTTCGCCTTCTGCATCAGCTCCTGC
TTGCGGGCCATCATCGCGTC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR Family Regulatory Protein; Transcriptional Regulator GntR Family Protein; FCD Domain Protein; GntR Domain-Containing Protein; Transcriptional Regulator Gntr Family; GntR-Family Transcriptional Regulator; AtrA Protein; Transcriptional Regulator GntR-Family; Mn-Dependent Transcriptional Regulator; Transcriptional Regulator GntR; Transcription Regulator; Gntr Family Transcriptional Regulator; Transcriptional Regulatory Protein; GntR Family Transcription Regulator Protein

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSKASQEAYRKIRAGILSGHFPAGQFVPEDEFAQFCGLSRTPVREAIAELVSEMLLQRSDTNRVFVPVWSDDDEEELFAL
RAMLESHCATRAARFITDEQIDELRAHCDFIDRAISQSDGPDVSGFVEGNRRFHAVILAAAQSERLGQLLRFVVSQIVVH
RTAEQYTRADMEQSQRDHRDLVSAFAMRDEIWAGAIANTHIRRAANAYRTMRQG

Sequences:

>Translated_214_residues
MSKASQEAYRKIRAGILSGHFPAGQFVPEDEFAQFCGLSRTPVREAIAELVSEMLLQRSDTNRVFVPVWSDDDEEELFAL
RAMLESHCATRAARFITDEQIDELRAHCDFIDRAISQSDGPDVSGFVEGNRRFHAVILAAAQSERLGQLLRFVVSQIVVH
RTAEQYTRADMEQSQRDHRDLVSAFAMRDEIWAGAIANTHIRRAANAYRTMRQG
>Mature_213_residues
SKASQEAYRKIRAGILSGHFPAGQFVPEDEFAQFCGLSRTPVREAIAELVSEMLLQRSDTNRVFVPVWSDDDEEELFALR
AMLESHCATRAARFITDEQIDELRAHCDFIDRAISQSDGPDVSGFVEGNRRFHAVILAAAQSERLGQLLRFVVSQIVVHR
TAEQYTRADMEQSQRDHRDLVSAFAMRDEIWAGAIANTHIRRAANAYRTMRQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24243; Mature: 24111

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKASQEAYRKIRAGILSGHFPAGQFVPEDEFAQFCGLSRTPVREAIAELVSEMLLQRSD
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
TNRVFVPVWSDDDEEELFALRAMLESHCATRAARFITDEQIDELRAHCDFIDRAISQSDG
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDVSGFVEGNRRFHAVILAAAQSERLGQLLRFVVSQIVVHRTAEQYTRADMEQSQRDHRD
CCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSAFAMRDEIWAGAIANTHIRRAANAYRTMRQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKASQEAYRKIRAGILSGHFPAGQFVPEDEFAQFCGLSRTPVREAIAELVSEMLLQRSD
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
TNRVFVPVWSDDDEEELFALRAMLESHCATRAARFITDEQIDELRAHCDFIDRAISQSDG
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDVSGFVEGNRRFHAVILAAAQSERLGQLLRFVVSQIVVHRTAEQYTRADMEQSQRDHRD
CCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSAFAMRDEIWAGAIANTHIRRAANAYRTMRQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA