Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198121

Identifier: 87198121

GI number: 87198121

Start: 97182

End: 98003

Strand: Direct

Name: 87198121

Synonym: Saro_0095

Alternate gene names: NA

Gene position: 97182-98003 (Clockwise)

Preceding gene: 87198118

Following gene: 87198123

Centisome position: 2.73

GC content: 64.72

Gene sequence:

>822_bases
ATGATGCCTCGTCTCGACAGCAGTCTCGCCTGGAAGACCGCGACACGCCTTGTCGCCACCAACCGCGACGTGCTGATGGC
GATTGCGGGGGTGTTCTTCCTGCTGCCCGGCCTTGCCTTCTCGGTCTTCGTGCCCGAGCCGCAGATGGCTCCGGGCACGC
CGCCCGGCGAGATGATGGAGATCATGGCCGAAGCCTGGACTTCGTCGCTGCCGTTGCTGATCGTGGTGACCCTTCTGCAG
ATGGCGGGCACGGTTACGGTGCTGATCGTGATGACCGATCCGGCACGTCCGACCGTCGCGCAATCGATCCGGCGGGGATT
CATGGCACTGGTGCCCTATGTGCTGGCGCAGGTCATGGTGGGCGGCGCACTCGGCATGGGATTTCTCGTGCTGGTGAGCG
CGGCGGCACTTACCGGCGTTCAGGCGATCGGCGCGATCGCGATCCTTGCTGCATTCCTGGCCATGGTCTGGTGCAGCCTG
CGCATGGCGCTGGTCGCTCCGGTCCTGGCAATCGAGGCGGAGCGCAACCCCGTGGCGGCGCTGCGACGCTCGTGGCAGCT
GACGCGCGGCAATTCCGGCCGGATGCTGGCGTTCTTCTTCCTCGCCGGACTGCTTTTCGCGGTGGTCTATGGCCTGGCGA
TGATGTTGGTGGGCGTGGTGCTGGTGCTTACGACCGGCGGAAGCGTGCAACACGTTCTCAACGCCGCGGTATCAAGCGCG
ATCACTTCGGGCGCTCTGGTCTATTTCATCGCGATGCTGGCGGCGGTCTACAGGCAGTTCGCGGGGCCGCCGAAGGAAGA
GATGATCCAGATCTTCGAATAA

Upstream 100 bases:

>100_bases
TCGATGGTTTCGCTTGCAGCCATGCCTTGCGAATGGCGCGGACCGGTCCGCTATTCAAGGGGGTTCGACAATGGCGGGTC
GTGGCTGCTAGTAAGCCCGA

Downstream 100 bases:

>100_bases
GGTCGGCCTTATTCCTTCCAGCCCCAACTGATCACGCAGGGCGGCACGTTGAGCGGTTCGAAGCCCTTGTCGATGTGACG
GAAGAACTGCCCCATGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMMEIMAEAWTSSLPLLIVVTLLQ
MAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMVGGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSL
RMALVAPVLAIEAERNPVAALRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA
ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE

Sequences:

>Translated_273_residues
MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMMEIMAEAWTSSLPLLIVVTLLQ
MAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMVGGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSL
RMALVAPVLAIEAERNPVAALRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA
ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE
>Mature_273_residues
MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMMEIMAEAWTSSLPLLIVVTLLQ
MAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMVGGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSL
RMALVAPVLAIEAERNPVAALRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA
ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28918; Mature: 28918

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMME
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHH
IMAEAWTSSLPLLIVVTLLQMAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMV
HHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
GGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSLRMALVAPVLAIEAERNPVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMME
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHH
IMAEAWTSSLPLLIVVTLLQMAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMV
HHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
GGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSLRMALVAPVLAIEAERNPVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA