| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751805
Identifier: 86751805
GI number: 86751805
Start: 5327726
End: 5328142
Strand: Direct
Name: 86751805
Synonym: RPB_4707
Alternate gene names: NA
Gene position: 5327726-5328142 (Clockwise)
Preceding gene: 86751803
Following gene: 86751810
Centisome position: 99.93
GC content: 70.74
Gene sequence:
>417_bases ATGCCACAGCCCTCGCTGACCAAGATCAAGCGCAACGGCAGGCCGCAGGCGCCGTGCGGCTCCGGCACCGCGCGGCGCGC GATGGCCGTGCTGGTCATGCTGATCGCGGCCTCGTCATTGGCGCGGCCGGCCTCGGCGCAGCAACCGGCGGCGGTCATCG TCGCGCCGCCGTTCATCGCGACGCTGTCCAACACCACACCGCTGGCGTTCGGAATGGACGCGCTGCAAGCGGAACGCGCA CTCGGCATGCCGCTGAACTACGTCAGCGGCCGGCCCGGCGACGAGATCTTCCTGGCGATCCGCACCCACGGCGGCAGCGG ATTCTTCAACCGCCGCGACCGGCTGTATCTGCAATTCCGCCGCGGCCGGCTGACCGGCTGGAAGGGCGACTGGGGCCGCA ACTGGATGTGGCCGTAG
Upstream 100 bases:
>100_bases TTTTCCGCCTCGATTTGACTGATATTGTACAGAAGCGCGCGGCCGCGCGCCGGGCTCGGGACCACGCCGCGTCGATGAGC CGAGGATCGAAAGGACGACG
Downstream 100 bases:
>100_bases GCCGCACGATCACGGTCGAGGCCGGGGTGAGTTTCAGAACCAGCGTTCGCTGACCATCACGGTGTCGCCGGGGCTGAGCG GCGTGCCGAGCGGGACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIATLSNTTPLAFGMDALQAERA LGMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFRRGRLTGWKGDWGRNWMWP
Sequences:
>Translated_138_residues MPQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIATLSNTTPLAFGMDALQAERA LGMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFRRGRLTGWKGDWGRNWMWP >Mature_137_residues PQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIATLSNTTPLAFGMDALQAERAL GMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFRRGRLTGWKGDWGRNWMWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15079; Mature: 14948
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIA CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEE TLSNTTPLAFGMDALQAERALGMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFR ECCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEE RGRLTGWKGDWGRNWMWP CCCCCCCCCCCCCCCCCC >Mature Secondary Structure PQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIA CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEE TLSNTTPLAFGMDALQAERALGMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFR ECCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEE RGRLTGWKGDWGRNWMWP CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA