Click here to switch to the map view.

The map label for this gene is 86751800

Identifier: 86751800

GI number: 86751800

Start: 5322970

End: 5323707

Strand: Direct

Name: 86751800

Synonym: RPB_4702

Alternate gene names: NA

Gene position: 5322970-5323707 (Clockwise)

Preceding gene: 86751799

Following gene: 86751801

Centisome position: 99.84

GC content: 65.72

Gene sequence:

>738_bases
GTGTCCAGCCCATCCCATCTTGCCGCACTCGACAAGCTCAAGACCCGGATCCAGGCGTTGCGCGGCAAGACCATCGCCAA
TGGCTGTACCGAGGAGGAGGCCCTGTCGGCGGCCGCCAAGGTCGCCGAGCTGCTCGATCGGCACGATCTGTCGCTGAGCG
ACGTCGAGATCCGCGAGACCCCGTGCGAGCAGATCAGCTTCGAGACGTTTCGCAAGAAGCGGATTCCGCTCGACGATTGC
GTCGGCGCGATCGCGCATTTTTGCGATTGCCGGGTCTGGCGCGAGAAGAATCCCACCGGCGAGAACCGCTACGTGTATTT
CGGGCTGCGTTCCGACATCGAGGTCGCGCATTATCTGACCGAGCTGATCGACGCCGCGGTGCGCGCCGAACTCGGCCGCT
ACAAGACCAGTGCGGATTATCGCCGGTTCCGCCACCAGGACCGTCATCTCGCCAACGCCTCCTTCAGCTTCGGCATGGTG
GTGTCGATCGGCGACAAGCTGATGGCGATGAAGGCCGCGCGCGACAAGGTCAATGACGGCGCCGGCCGCGGCCTCGTGGT
GCTGAAATCCGCGGTGGTCGACGAGGAGTTCTGCAAGCTCGACCTCAAGCTCCGCGCGTCGCGCGGCACCGGCCGGACGG
TGTCGATGACGGCCTATGAGGCCGGCGGCAGCGCCGGGGCGAAGCTCACGATCAATCCCGAAATCGGCGCCGATCCGCCC
GCCGCGCTGAAGCGCTAG

Upstream 100 bases:

>100_bases
ATGGCCAGGAATTGCTGGCCCTGGTAAATGCCTCAGGCAGCTGAACCGGCTGCCGCGCGGACGCTCGCCGCGATCACGGA
TTGTCAGAGAAAGGGTATCG

Downstream 100 bases:

>100_bases
CCGGCCATCGGCCACTCAGCATCCGCGTCCCGGGCGCGGCGCAGCACGCAGTGCTGCTCCGCAGAAACCCTGCCCCCGCT
TTGCGCCGATCACCGGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSSPSHLAALDKLKTRIQALRGKTIANGCTEEEALSAAAKVAELLDRHDLSLSDVEIRETPCEQISFETFRKKRIPLDDC
VGAIAHFCDCRVWREKNPTGENRYVYFGLRSDIEVAHYLTELIDAAVRAELGRYKTSADYRRFRHQDRHLANASFSFGMV
VSIGDKLMAMKAARDKVNDGAGRGLVVLKSAVVDEEFCKLDLKLRASRGTGRTVSMTAYEAGGSAGAKLTINPEIGADPP
AALKR

Sequences:

>Translated_245_residues
MSSPSHLAALDKLKTRIQALRGKTIANGCTEEEALSAAAKVAELLDRHDLSLSDVEIRETPCEQISFETFRKKRIPLDDC
VGAIAHFCDCRVWREKNPTGENRYVYFGLRSDIEVAHYLTELIDAAVRAELGRYKTSADYRRFRHQDRHLANASFSFGMV
VSIGDKLMAMKAARDKVNDGAGRGLVVLKSAVVDEEFCKLDLKLRASRGTGRTVSMTAYEAGGSAGAKLTINPEIGADPP
AALKR
>Mature_244_residues
SSPSHLAALDKLKTRIQALRGKTIANGCTEEEALSAAAKVAELLDRHDLSLSDVEIRETPCEQISFETFRKKRIPLDDCV
GAIAHFCDCRVWREKNPTGENRYVYFGLRSDIEVAHYLTELIDAAVRAELGRYKTSADYRRFRHQDRHLANASFSFGMVV
SIGDKLMAMKAARDKVNDGAGRGLVVLKSAVVDEEFCKLDLKLRASRGTGRTVSMTAYEAGGSAGAKLTINPEIGADPPA
ALKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26960; Mature: 26829

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPSHLAALDKLKTRIQALRGKTIANGCTEEEALSAAAKVAELLDRHDLSLSDVEIRET
CCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PCEQISFETFRKKRIPLDDCVGAIAHFCDCRVWREKNPTGENRYVYFGLRSDIEVAHYLT
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHH
ELIDAAVRAELGRYKTSADYRRFRHQDRHLANASFSFGMVVSIGDKLMAMKAARDKVNDG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCC
AGRGLVVLKSAVVDEEFCKLDLKLRASRGTGRTVSMTAYEAGGSAGAKLTINPEIGADPP
CCCCEEEHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCC
AALKR
HHHCC
>Mature Secondary Structure 
SSPSHLAALDKLKTRIQALRGKTIANGCTEEEALSAAAKVAELLDRHDLSLSDVEIRET
CCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PCEQISFETFRKKRIPLDDCVGAIAHFCDCRVWREKNPTGENRYVYFGLRSDIEVAHYLT
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHH
ELIDAAVRAELGRYKTSADYRRFRHQDRHLANASFSFGMVVSIGDKLMAMKAARDKVNDG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCC
AGRGLVVLKSAVVDEEFCKLDLKLRASRGTGRTVSMTAYEAGGSAGAKLTINPEIGADPP
CCCCEEEHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCC
AALKR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA