| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is mtnP [H]
Identifier: 86751796
GI number: 86751796
Start: 5316808
End: 5317713
Strand: Reverse
Name: mtnP [H]
Synonym: RPB_4698
Alternate gene names: 86751796
Gene position: 5317713-5316808 (Counterclockwise)
Preceding gene: 86751802
Following gene: 86751795
Centisome position: 99.74
GC content: 67.33
Gene sequence:
>906_bases ATGCGCTCGGAACGACGCGGGAGACAGGGCATGACCAGGGCGGTACTCGGCATCATCGGCGGATCCGGCATCTATGATTT GCCGGGGCTGGAGGACGTCCGCGAGGAGGCGATCGCGAGCCCGTGGGGCGAGCCGTCCTCGGCGGTGCGGCGCGGCAACA TCGCCGGCCTGCCGATCGTGTTCCTGCCGCGCCACGACAAGGGCCACCGGCTGTCGCCCTCCGACATCAACTACCGCGCC AATATCGACGTGCTGAAACGCGCCGGTGTCACCGACCTGATCTCGCTGTCGGCCTGCGGCTCGTTCAAGGAAGAGCTGCC GCCCGGCACCTTCGTGCTGGTCGACCAGTTCGTCGATCGCACCTACAAGCGCGAGAGTTCGTTCTTCGGCCGTGGCTGCG TCGCCCACGTCTCGATGGCGCATCCGGTGAGCCCGCGGCTGCGCATCCATCTCGCCGCCGCCGCCGAGGCCGAAGGCATC GCGTTCGCGCGCGGCGGCACCTACCTCTGCATGGAAGGCCCGCAATTCTCCAGCTACGCCGAGAGCGTCACCTACAAGCA GCTCGGCTATTCGGTGATCGGCATGACCAACATGCCGGAGGCCAAGCTCGCCCGCGAGGCCGAGATCTGCTACGCCACCG TGGCGATGGTGACCGATTTCGACTGCTGGCACCCCGACCACGACGCCGTCACGGTGCAGGACATCATCCGGGTGCTGACC ACCAATGCCGAAAAGGCCAAGAGCCTGGTGGCGCGGCTGGCGCAGGACTTCCCGCGCGAGCACGAAGACTGCCCGATCGG CTCCGACCGCGCGCTGGACACCGCTCTGATCACCCAGCCCGACGCGCGCGATCCGGAACTGCTGAAGAAGCTGGATGCGG TGGCGGGGCGGATTTTGAAGGGTTAG
Upstream 100 bases:
>100_bases GTCGCGCGTCGGGCCGCGGCTGGCGCGCGCCGTCGGTAAAATGAGACGTTTGTCGGATACGCCTGATATGGGGGTTGTCG GGCCACCGCGCGCATGTTGA
Downstream 100 bases:
>100_bases TCACCACCGCCGTCATTGCCGGGCTCGACCCGGCAATCCATCCTCTTCAATGATGGATGCCCGGGTCAAGCCCGGGCATG ACGAGTTGAGAAGTTGCGGT
Product: 5'-methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRSERRGRQGMTRAVLGIIGGSGIYDLPGLEDVREEAIASPWGEPSSAVRRGNIAGLPIVFLPRHDKGHRLSPSDINYRA NIDVLKRAGVTDLISLSACGSFKEELPPGTFVLVDQFVDRTYKRESSFFGRGCVAHVSMAHPVSPRLRIHLAAAAEAEGI AFARGGTYLCMEGPQFSSYAESVTYKQLGYSVIGMTNMPEAKLAREAEICYATVAMVTDFDCWHPDHDAVTVQDIIRVLT TNAEKAKSLVARLAQDFPREHEDCPIGSDRALDTALITQPDARDPELLKKLDAVAGRILKG
Sequences:
>Translated_301_residues MRSERRGRQGMTRAVLGIIGGSGIYDLPGLEDVREEAIASPWGEPSSAVRRGNIAGLPIVFLPRHDKGHRLSPSDINYRA NIDVLKRAGVTDLISLSACGSFKEELPPGTFVLVDQFVDRTYKRESSFFGRGCVAHVSMAHPVSPRLRIHLAAAAEAEGI AFARGGTYLCMEGPQFSSYAESVTYKQLGYSVIGMTNMPEAKLAREAEICYATVAMVTDFDCWHPDHDAVTVQDIIRVLT TNAEKAKSLVARLAQDFPREHEDCPIGSDRALDTALITQPDARDPELLKKLDAVAGRILKG >Mature_301_residues MRSERRGRQGMTRAVLGIIGGSGIYDLPGLEDVREEAIASPWGEPSSAVRRGNIAGLPIVFLPRHDKGHRLSPSDINYRA NIDVLKRAGVTDLISLSACGSFKEELPPGTFVLVDQFVDRTYKRESSFFGRGCVAHVSMAHPVSPRLRIHLAAAAEAEGI AFARGGTYLCMEGPQFSSYAESVTYKQLGYSVIGMTNMPEAKLAREAEICYATVAMVTDFDCWHPDHDAVTVQDIIRVLT TNAEKAKSLVARLAQDFPREHEDCPIGSDRALDTALITQPDARDPELLKKLDAVAGRILKG
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=245, Percent_Identity=44.4897959183673, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI71980569, Length=240, Percent_Identity=42.0833333333333, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6323045, Length=296, Percent_Identity=35.1351351351351, Blast_Score=167, Evalue=2e-42, Organism=Drosophila melanogaster, GI20130079, Length=251, Percent_Identity=41.8326693227092, Blast_Score=190, Evalue=8e-49, Organism=Drosophila melanogaster, GI221459247, Length=250, Percent_Identity=31.2, Blast_Score=150, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010044 - InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 32867; Mature: 32867
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSERRGRQGMTRAVLGIIGGSGIYDLPGLEDVREEAIASPWGEPSSAVRRGNIAGLPIV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEE FLPRHDKGHRLSPSDINYRANIDVLKRAGVTDLISLSACGSFKEELPPGTFVLVDQFVDR EEECCCCCCCCCCCCCCEECCHHHHHHCCHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHH TYKRESSFFGRGCVAHVSMAHPVSPRLRIHLAAAAEAEGIAFARGGTYLCMEGPQFSSYA HHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCEEEEECCCCHHHHH ESVTYKQLGYSVIGMTNMPEAKLAREAEICYATVAMVTDFDCWHPDHDAVTVQDIIRVLT HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH TNAEKAKSLVARLAQDFPREHEDCPIGSDRALDTALITQPDARDPELLKKLDAVAGRILK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHCC G C >Mature Secondary Structure MRSERRGRQGMTRAVLGIIGGSGIYDLPGLEDVREEAIASPWGEPSSAVRRGNIAGLPIV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEE FLPRHDKGHRLSPSDINYRANIDVLKRAGVTDLISLSACGSFKEELPPGTFVLVDQFVDR EEECCCCCCCCCCCCCCEECCHHHHHHCCHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHH TYKRESSFFGRGCVAHVSMAHPVSPRLRIHLAAAAEAEGIAFARGGTYLCMEGPQFSSYA HHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCEEEEECCCCHHHHH ESVTYKQLGYSVIGMTNMPEAKLAREAEICYATVAMVTDFDCWHPDHDAVTVQDIIRVLT HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH TNAEKAKSLVARLAQDFPREHEDCPIGSDRALDTALITQPDARDPELLKKLDAVAGRILK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA