| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is livK [C]
Identifier: 86751782
GI number: 86751782
Start: 5298431
End: 5299651
Strand: Direct
Name: livK [C]
Synonym: RPB_4684
Alternate gene names: 86751782
Gene position: 5298431-5299651 (Clockwise)
Preceding gene: 86751781
Following gene: 86751784
Centisome position: 99.38
GC content: 62.16
Gene sequence:
>1221_bases ATGTCCACCCGCAACGCGCTGCTTGCAGCCGGACTATTTGCGCTCGCCGCAACCCAGCCTGCCTTCGCCCAGAAGCAATA CGGCCCCGGCGTCACCGACACCGAAATCAAGATCGGGCAGACCATGCCCTACAGCGGCCCGGCTTCGGCATATGGCGTGC AGGGCCATGTCCAGAACGCCTACTACGCGATGATCAACGCGAAGGGCGGCGTCAACGGCCGCAAGATCAACCTGATCAGC CTCGACGACGCCTATTCGCCGCCGAAGACGGTGGAGCAGACCCGCAAGCTGGTCGAGCAGGACGAGGTGCTGGCGATCGT CGGCACCGTCGGCACGCCGACCAATTCCGCGACTCAGAAATATCTCAACGGCAAAAAGGTGCCGCAGATCTTCATCTCCA CGGGGGCGGCAAAATGGGATGATCCGAAGACCTTCCCGTGGACCACGCAGCTCTATCCTCCCTATCAGATGGAAGGCATG ATTTTCGCGAAGTACCTGCTCAAGAACAAGCCCGACGCCAAGCTCGGCGTGTTCTCGCAGAACGACGACGCCGGCAAGGA CTACGTCAAGGGCCTGAAGGAAGGGCTCGGCGACAAGGCCAAGACGATGATCGTCAAGGAGGTCACCTACGAGGTCACCG ATCCGACCGTCGACTCGCAGATCGTCGCGCTGAAGGCGTCGGGCGCCGACACGCTGTTCACGATGGCGACGCCGAAATTT GGCGCCCAAGCGATCCGCAAGGTCCACGAACTGAACTGGAAGCCGCTCAACTTCGTCGTCAGCGTCGCCAGCTCGATCAA GGGCGTGCTCGAACCCGCCGGCAGCGAAGCCTCGACCGGGTTGCTCACCGCGCTCGCCATGAAGACGCCGACCGACCCGC GGTTCGAGAACGATGCCGACGTCAAGGAATTCAAGGAATTCCTGGCCAAGTGGTTTCCGAAAGGCGACATCGCCGACGGC AGCGTGGTGATCGGCTACATCTCGGCCTATATGACGGCGAAGACGCTCGAAGCCTGCGGCGACAATCTCACCCGCGACAA CCTGCTCAAGCAGGCGACCAACATCAAGCCGACGGTTGCTCCGCTGCTACTGCCGGGCGTCAAGATCTCGACGCGGCCGG ACCGCTACGCGCCCTACACCCAGATGCAGATCGCCCGTTTCGACGGCAAGAGCTGGGTGCCTGAAGGCGAAGTGTTCAAC ACCGACGCGACCAGCCAGTAA
Upstream 100 bases:
>100_bases CAGCGTCGGACCGATCGTCGGCCAACGACTCGACAATCCGGACGATCGACGTGCCAGCCCGCACCGCAGAGTGCGGCTTT CAACGAGAAGAGGAAATGCC
Downstream 100 bases:
>100_bases GGTGGCGACGAACTAACGAGCCGACGAACGGACGTCATCCTGAGGTGCGCGCCCTTGCGCGCCTCGAAGGATGCGAGACG GACCTCGCGGCTCATCCTTC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSTRNALLAAGLFALAATQPAFAQKQYGPGVTDTEIKIGQTMPYSGPASAYGVQGHVQNAYYAMINAKGGVNGRKINLIS LDDAYSPPKTVEQTRKLVEQDEVLAIVGTVGTPTNSATQKYLNGKKVPQIFISTGAAKWDDPKTFPWTTQLYPPYQMEGM IFAKYLLKNKPDAKLGVFSQNDDAGKDYVKGLKEGLGDKAKTMIVKEVTYEVTDPTVDSQIVALKASGADTLFTMATPKF GAQAIRKVHELNWKPLNFVVSVASSIKGVLEPAGSEASTGLLTALAMKTPTDPRFENDADVKEFKEFLAKWFPKGDIADG SVVIGYISAYMTAKTLEACGDNLTRDNLLKQATNIKPTVAPLLLPGVKISTRPDRYAPYTQMQIARFDGKSWVPEGEVFN TDATSQ
Sequences:
>Translated_406_residues MSTRNALLAAGLFALAATQPAFAQKQYGPGVTDTEIKIGQTMPYSGPASAYGVQGHVQNAYYAMINAKGGVNGRKINLIS LDDAYSPPKTVEQTRKLVEQDEVLAIVGTVGTPTNSATQKYLNGKKVPQIFISTGAAKWDDPKTFPWTTQLYPPYQMEGM IFAKYLLKNKPDAKLGVFSQNDDAGKDYVKGLKEGLGDKAKTMIVKEVTYEVTDPTVDSQIVALKASGADTLFTMATPKF GAQAIRKVHELNWKPLNFVVSVASSIKGVLEPAGSEASTGLLTALAMKTPTDPRFENDADVKEFKEFLAKWFPKGDIADG SVVIGYISAYMTAKTLEACGDNLTRDNLLKQATNIKPTVAPLLLPGVKISTRPDRYAPYTQMQIARFDGKSWVPEGEVFN TDATSQ >Mature_405_residues STRNALLAAGLFALAATQPAFAQKQYGPGVTDTEIKIGQTMPYSGPASAYGVQGHVQNAYYAMINAKGGVNGRKINLISL DDAYSPPKTVEQTRKLVEQDEVLAIVGTVGTPTNSATQKYLNGKKVPQIFISTGAAKWDDPKTFPWTTQLYPPYQMEGMI FAKYLLKNKPDAKLGVFSQNDDAGKDYVKGLKEGLGDKAKTMIVKEVTYEVTDPTVDSQIVALKASGADTLFTMATPKFG AQAIRKVHELNWKPLNFVVSVASSIKGVLEPAGSEASTGLLTALAMKTPTDPRFENDADVKEFKEFLAKWFPKGDIADGS VVIGYISAYMTAKTLEACGDNLTRDNLLKQATNIKPTVAPLLLPGVKISTRPDRYAPYTQMQIARFDGKSWVPEGEVFNT DATSQ
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43986; Mature: 43854
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRNALLAAGLFALAATQPAFAQKQYGPGVTDTEIKIGQTMPYSGPASAYGVQGHVQNA CCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCE YYAMINAKGGVNGRKINLISLDDAYSPPKTVEQTRKLVEQDEVLAIVGTVGTPTNSATQK EEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH YLNGKKVPQIFISTGAAKWDDPKTFPWTTQLYPPYQMEGMIFAKYLLKNKPDAKLGVFSQ HHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECC NDDAGKDYVKGLKEGLGDKAKTMIVKEVTYEVTDPTVDSQIVALKASGADTLFTMATPKF CCCCHHHHHHHHHHHCCCHHHHEEEEEHEEEECCCCCCCEEEEEEECCCCEEEEECCCCH GAQAIRKVHELNWKPLNFVVSVASSIKGVLEPAGSEASTGLLTALAMKTPTDPRFENDAD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC VKEFKEFLAKWFPKGDIADGSVVIGYISAYMTAKTLEACGDNLTRDNLLKQATNIKPTVA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHH PLLLPGVKISTRPDRYAPYTQMQIARFDGKSWVPEGEVFNTDATSQ HHHCCCCEECCCCCCCCCCHHEEEEEECCCCCCCCCCEECCCCCCC >Mature Secondary Structure STRNALLAAGLFALAATQPAFAQKQYGPGVTDTEIKIGQTMPYSGPASAYGVQGHVQNA CCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCE YYAMINAKGGVNGRKINLISLDDAYSPPKTVEQTRKLVEQDEVLAIVGTVGTPTNSATQK EEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH YLNGKKVPQIFISTGAAKWDDPKTFPWTTQLYPPYQMEGMIFAKYLLKNKPDAKLGVFSQ HHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECC NDDAGKDYVKGLKEGLGDKAKTMIVKEVTYEVTDPTVDSQIVALKASGADTLFTMATPKF CCCCHHHHHHHHHHHCCCHHHHEEEEEHEEEECCCCCCCEEEEEEECCCCEEEEECCCCH GAQAIRKVHELNWKPLNFVVSVASSIKGVLEPAGSEASTGLLTALAMKTPTDPRFENDAD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC VKEFKEFLAKWFPKGDIADGSVVIGYISAYMTAKTLEACGDNLTRDNLLKQATNIKPTVA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHH PLLLPGVKISTRPDRYAPYTQMQIARFDGKSWVPEGEVFNTDATSQ HHHCCCCEECCCCCCCCCCHHEEEEEECCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA