| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is aroK [H]
Identifier: 86751755
GI number: 86751755
Start: 5268586
End: 5269503
Strand: Direct
Name: aroK [H]
Synonym: RPB_4657
Alternate gene names: 86751755
Gene position: 5268586-5269503 (Clockwise)
Preceding gene: 86751750
Following gene: 86751763
Centisome position: 98.82
GC content: 67.43
Gene sequence:
>918_bases ATGACCCAGTCCGCCGAATCCGACGCCAGCTTCCTGCTGGAGCTCGGGCAGCGTGTCCGCACGTTGCGCGGGTTGCGCGG GATGTCGCGCAAGGTGCTGGCCAAAGTATCCGGGATCTCCGAACGCTACATCGCCCAGCTCGAAAGCGGCAAGGGCAACG TCTCGATCATGCTGCTGCGCCGGGTGTCCGACGCGCTGGCCACGCCGCTGGAAGATCTGCTGCCGAGCGGCGATCCGTCG ATCGACTGGCCGGTGATCCGCGACCTGGTCCGCCGCGCCACGCCGGTGCAGATCGCGCACGCCAAGGACGTGCTGTCCGG CATGGGACGTCTCGGCGCCGGCGCCAGGCGCGAACACGCGTTTCACGGCATCGCCTTGATCGGCCTGCGCGGCGCCGGCA AGTCGACGCTCGGCCGGATGTTGGCCGACAAGATCGGCTGGGCCTTCGTCGAGCTGAACAAGGAAATCGAACGTCAAAAC GGCTTGTCGGTGGCGGAGATCATCGCGCTGTACGGCCAGGAAGGTTTTCGCCGCATGGAGCAGGCGGCGCTGGCGCAATT GCTGGCGCGCAAGGAACTGATGGTGCTGGCGACCGGCGGCGGCATCGTCTCCGAAGCGATTACTTTCGATCAGATCCTGT CGTCGTTCTACACCATCTGGCTGAAGGCCGAGCCCGAGGAGCACATGGCGCGGGTGCGCGGCCAGGGCGACCTGCGGCCG ATGGCCGACGACCGCGCCGCAATGCAGGAGCTGCGCACCATCCTGCAGAGCCGCGAACCGCTCTACGCCCGCGCCTCCGG CGTGCTCGACACTGCCGGCCTGACGGTCGAGGCGGCCGCGGCGAAGTTGACCGCAATGGTGTCGCCGGTGCTGTGCCGGG ATGCGTGTGCGTTCGGATTGAAGAACGAGGCGGTGTAA
Upstream 100 bases:
>100_bases TCATTAGAATTATAATGCATAGGAAGCCACCGGACCGGGTTGCTGTCAATCCTCAGCGGCACTATGATTCCGCTCAACTT CTCATGAGCGTGCTTCAGAC
Downstream 100 bases:
>100_bases GACGCTACAAGTAGCAGCGCCGTCATCCTGAGGTGCTCGCCCGCACGGGCGAGCCTCGAAGGATGCGGCGGCCAGCACTG CGATTGAGGCTCATCCTTCG
Product: anaerobic benzoate catabolism transcriptional regulator
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTQSAESDASFLLELGQRVRTLRGLRGMSRKVLAKVSGISERYIAQLESGKGNVSIMLLRRVSDALATPLEDLLPSGDPS IDWPVIRDLVRRATPVQIAHAKDVLSGMGRLGAGARREHAFHGIALIGLRGAGKSTLGRMLADKIGWAFVELNKEIERQN GLSVAEIIALYGQEGFRRMEQAALAQLLARKELMVLATGGGIVSEAITFDQILSSFYTIWLKAEPEEHMARVRGQGDLRP MADDRAAMQELRTILQSREPLYARASGVLDTAGLTVEAAAAKLTAMVSPVLCRDACAFGLKNEAV
Sequences:
>Translated_305_residues MTQSAESDASFLLELGQRVRTLRGLRGMSRKVLAKVSGISERYIAQLESGKGNVSIMLLRRVSDALATPLEDLLPSGDPS IDWPVIRDLVRRATPVQIAHAKDVLSGMGRLGAGARREHAFHGIALIGLRGAGKSTLGRMLADKIGWAFVELNKEIERQN GLSVAEIIALYGQEGFRRMEQAALAQLLARKELMVLATGGGIVSEAITFDQILSSFYTIWLKAEPEEHMARVRGQGDLRP MADDRAAMQELRTILQSREPLYARASGVLDTAGLTVEAAAAKLTAMVSPVLCRDACAFGLKNEAV >Mature_304_residues TQSAESDASFLLELGQRVRTLRGLRGMSRKVLAKVSGISERYIAQLESGKGNVSIMLLRRVSDALATPLEDLLPSGDPSI DWPVIRDLVRRATPVQIAHAKDVLSGMGRLGAGARREHAFHGIALIGLRGAGKSTLGRMLADKIGWAFVELNKEIERQNG LSVAEIIALYGQEGFRRMEQAALAQLLARKELMVLATGGGIVSEAITFDQILSSFYTIWLKAEPEEHMARVRGQGDLRPM ADDRAAMQELRTILQSREPLYARASGVLDTAGLTVEAAAAKLTAMVSPVLCRDACAFGLKNEAV
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=147, Percent_Identity=34.0136054421769, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786587, Length=146, Percent_Identity=31.5068493150685, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 33048; Mature: 32917
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50943 HTH_CROC1 ; PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSAESDASFLLELGQRVRTLRGLRGMSRKVLAKVSGISERYIAQLESGKGNVSIMLLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHH RVSDALATPLEDLLPSGDPSIDWPVIRDLVRRATPVQIAHAKDVLSGMGRLGAGARREHA HHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH FHGIALIGLRGAGKSTLGRMLADKIGWAFVELNKEIERQNGLSVAEIIALYGQEGFRRME HCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QAALAQLLARKELMVLATGGGIVSEAITFDQILSSFYTIWLKAEPEEHMARVRGQGDLRP HHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCCCCC MADDRAAMQELRTILQSREPLYARASGVLDTAGLTVEAAAAKLTAMVSPVLCRDACAFGL CCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KNEAV CCCCC >Mature Secondary Structure TQSAESDASFLLELGQRVRTLRGLRGMSRKVLAKVSGISERYIAQLESGKGNVSIMLLR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHH RVSDALATPLEDLLPSGDPSIDWPVIRDLVRRATPVQIAHAKDVLSGMGRLGAGARREHA HHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH FHGIALIGLRGAGKSTLGRMLADKIGWAFVELNKEIERQNGLSVAEIIALYGQEGFRRME HCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QAALAQLLARKELMVLATGGGIVSEAITFDQILSSFYTIWLKAEPEEHMARVRGQGDLRP HHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCCCCC MADDRAAMQELRTILQSREPLYARASGVLDTAGLTVEAAAAKLTAMVSPVLCRDACAFGL CCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KNEAV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]