| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cah [H]
Identifier: 86751723
GI number: 86751723
Start: 5225798
End: 5226589
Strand: Direct
Name: cah [H]
Synonym: RPB_4625
Alternate gene names: 86751723
Gene position: 5225798-5226589 (Clockwise)
Preceding gene: 86751722
Following gene: 86751725
Centisome position: 98.01
GC content: 63.76
Gene sequence:
>792_bases ATGGAACCCATCCTCATCCCGGAGCACAGACCGATGGACCGTCGCGCTATCCTCAAGGCCTTCGCGGGCCTCGCCCTTTG TCCGCTTTGCGCCAGCGCCGGCGTTGCCGGGGAAGGCGGGCATCATTGGGGCTATGAAGGCGACGGCGGACCGGCGAAGT GGGGCGAGCTCGATCCGGCCAACCAGTTCTGCAGTGTCGGCGTGCAGCAATCGCCGATCGATATCGGCACGACGATCGGA GCCAATCTGTACCCGATCGAGATCCGTTGGGCGGACACGGCCGACACCATCGTCAACAACGGCCACACCATCCAGCTCAA CGTCGCCGAAGGCAGTCACCTGAAGCTCGGCGGCGTGACCTTCAAGCTGGTTCAGTTCCATTTCCATCATCCGAGCGAGC ATCTGATCGACGGCAAGAACTTCCCGATGGAAGTGCACTTCGTTCATCGCGCGGATTCCGGCACGCTCGGCGTGGTCGGC GTTCTGATGCAGCCCGGCAAGGCCAACGCCGCCTTCAGCAAGATCGTCGCGACAATGCCGCAGAGCGAGGGACCGGCGAA AAAGGCCGACCCGGCGATCGATCCGAACGCGCTGCTGCCGGAGACCCGCAACTATTACCGCTACGAAGGCTCGCTGACGA CGCCGCCATGCTCCGAGATCGTCGACTGGATGGTGCTGGCGAGTCCGATCACCGTGGCGGCCGACGACATCGCCGCCTTC GCCAAGCTGTATCCGATGAATGCGCGGCCGGTGCAGAAGGACAACCGCCGCTTCGTGCTGCAGTCGAACTGA
Upstream 100 bases:
>100_bases GACGTCGAGTGGATCGCACGCATCGTCTGGGCCAGCCAGTAACCAACTGTAAGTCCTAGCTGTTCGTCGGGACTTCACAA AGTTCCCGGGGTGACGGATG
Downstream 100 bases:
>100_bases GCGACCGCAACGCGCATCGCAGATACAAAAAGACCCGAGCCGCTGTCCGGCTCGGGTCTTTTCGCTGAACTCTGAACGTG GTTGCTGCTGTGGTCAGCCG
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MEPILIPEHRPMDRRAILKAFAGLALCPLCASAGVAGEGGHHWGYEGDGGPAKWGELDPANQFCSVGVQQSPIDIGTTIG ANLYPIEIRWADTADTIVNNGHTIQLNVAEGSHLKLGGVTFKLVQFHFHHPSEHLIDGKNFPMEVHFVHRADSGTLGVVG VLMQPGKANAAFSKIVATMPQSEGPAKKADPAIDPNALLPETRNYYRYEGSLTTPPCSEIVDWMVLASPITVAADDIAAF AKLYPMNARPVQKDNRRFVLQSN
Sequences:
>Translated_263_residues MEPILIPEHRPMDRRAILKAFAGLALCPLCASAGVAGEGGHHWGYEGDGGPAKWGELDPANQFCSVGVQQSPIDIGTTIG ANLYPIEIRWADTADTIVNNGHTIQLNVAEGSHLKLGGVTFKLVQFHFHHPSEHLIDGKNFPMEVHFVHRADSGTLGVVG VLMQPGKANAAFSKIVATMPQSEGPAKKADPAIDPNALLPETRNYYRYEGSLTTPPCSEIVDWMVLASPITVAADDIAAF AKLYPMNARPVQKDNRRFVLQSN >Mature_263_residues MEPILIPEHRPMDRRAILKAFAGLALCPLCASAGVAGEGGHHWGYEGDGGPAKWGELDPANQFCSVGVQQSPIDIGTTIG ANLYPIEIRWADTADTIVNNGHTIQLNVAEGSHLKLGGVTFKLVQFHFHHPSEHLIDGKNFPMEVHFVHRADSGTLGVVG VLMQPGKANAAFSKIVATMPQSEGPAKKADPAIDPNALLPETRNYYRYEGSLTTPPCSEIVDWMVLASPITVAADDIAAF AKLYPMNARPVQKDNRRFVLQSN
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG3338
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-carbonic anhydrase family [H]
Homologues:
Organism=Homo sapiens, GI4557395, Length=230, Percent_Identity=34.7826086956522, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI4885101, Length=234, Percent_Identity=35.8974358974359, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI258679498, Length=248, Percent_Identity=33.8709677419355, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI192447434, Length=248, Percent_Identity=33.8709677419355, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI192447432, Length=248, Percent_Identity=33.8709677419355, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI192447430, Length=248, Percent_Identity=33.8709677419355, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI4502517, Length=248, Percent_Identity=33.8709677419355, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI45935383, Length=292, Percent_Identity=30.8219178082192, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI4502515, Length=292, Percent_Identity=30.8219178082192, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI4885099, Length=258, Percent_Identity=31.0077519379845, Blast_Score=114, Evalue=8e-26, Organism=Homo sapiens, GI38348436, Length=229, Percent_Identity=32.7510917030568, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI169636420, Length=233, Percent_Identity=31.7596566523605, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI62240989, Length=173, Percent_Identity=35.2601156069364, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI4502521, Length=235, Percent_Identity=30.2127659574468, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI4502519, Length=272, Percent_Identity=30.8823529411765, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI6912284, Length=271, Percent_Identity=31.7343173431734, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI22027500, Length=226, Percent_Identity=30.5309734513274, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI6005723, Length=205, Percent_Identity=32.1951219512195, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI91208428, Length=237, Percent_Identity=29.535864978903, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI194097398, Length=269, Percent_Identity=27.1375464684015, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI70167127, Length=249, Percent_Identity=27.3092369477912, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17568715, Length=246, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71995280, Length=257, Percent_Identity=30.7392996108949, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17569163, Length=227, Percent_Identity=29.5154185022026, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17569165, Length=227, Percent_Identity=29.5154185022026, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI32564019, Length=227, Percent_Identity=27.3127753303965, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17553578, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI17737413, Length=244, Percent_Identity=33.1967213114754, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24645604, Length=279, Percent_Identity=29.3906810035842, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI221329761, Length=281, Percent_Identity=26.6903914590747, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI18858185, Length=239, Percent_Identity=27.1966527196653, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI21358169, Length=294, Percent_Identity=27.5510204081633, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI161079350, Length=266, Percent_Identity=27.0676691729323, Blast_Score=81, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001148 - InterPro: IPR018338 - InterPro: IPR018340 [H]
Pfam domain/function: PF00194 Carb_anhydrase [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 28424; Mature: 28424
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00162 ALPHA_CA_1 ; PS51144 ALPHA_CA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPILIPEHRPMDRRAILKAFAGLALCPLCASAGVAGEGGHHWGYEGDGGPAKWGELDPA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH NQFCSVGVQQSPIDIGTTIGANLYPIEIRWADTADTIVNNGHTIQLNVAEGSHLKLGGVT HHHHHCCCCCCCCEECCCCCCEEEEEEEEECCCHHHHHCCCCEEEEEECCCCEEEECCEE FKLVQFHFHHPSEHLIDGKNFPMEVHFVHRADSGTLGVVGVLMQPGKANAAFSKIVATMP EEEEEEEECCCHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCC QSEGPAKKADPAIDPNALLPETRNYYRYEGSLTTPPCSEIVDWMVLASPITVAADDIAAF CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHH AKLYPMNARPVQKDNRRFVLQSN HHHCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MEPILIPEHRPMDRRAILKAFAGLALCPLCASAGVAGEGGHHWGYEGDGGPAKWGELDPA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH NQFCSVGVQQSPIDIGTTIGANLYPIEIRWADTADTIVNNGHTIQLNVAEGSHLKLGGVT HHHHHCCCCCCCCEECCCCCCEEEEEEEEECCCHHHHHCCCCEEEEEECCCCEEEECCEE FKLVQFHFHHPSEHLIDGKNFPMEVHFVHRADSGTLGVVGVLMQPGKANAAFSKIVATMP EEEEEEEECCCHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCC QSEGPAKKADPAIDPNALLPETRNYYRYEGSLTTPPCSEIVDWMVLASPITVAADDIAAF CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHH AKLYPMNARPVQKDNRRFVLQSN HHHCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9811652 [H]