Click here to switch to the map view.

The map label for this gene is estR [H]

Identifier: 86751700

GI number: 86751700

Start: 5195707

End: 5196615

Strand: Direct

Name: estR [H]

Synonym: RPB_4602

Alternate gene names: 86751700

Gene position: 5195707-5196615 (Clockwise)

Preceding gene: 86751691

Following gene: 86751701

Centisome position: 97.45

GC content: 67.66

Gene sequence:

>909_bases
ATGAACACCAACATCACCCTCCGTCAGCTCGGCTTCCTGGTCGCCGTCGCCGACACCCTGAATTTCTCGCGCGCGGCCGA
GCAGTGTTTCGTCACCCAACCGACGCTGAGCGCCGGTTTGAAGGAGCTCGAGGATCGGCTCGGCGTCGTGCTGGCGGAGC
GCACCAAGCGCTCGGTGCTGCTGACGCCGGTGGGTGCGGTGATCGCCGCGCGAGCTCGCGCGGTGCTGCTGGCGGCGCGC
GAAATCGAAACGCTCGCCGCAACCCAGGCTGCGCCGGATACCGGCGATCTGCGGCTCGGCGCCATCCCCACCATCGGGCC
TTATCTGATTCCGCGCGCGCTGCCCGAAATCCGCCGAGCCTTTCCCGGCCTCCGATTGCTGATGCGAGAAGAGATGACCG
AGCCGCTGCTCGATGGCCTGCATCACGGGCGGCTCGATCTGATCCTGTTCGCGCTACCGTTCGAGACCAGCGGCATCGAG
ATCATGGAGCTGTTCGAGGACGGCTATCATCTCGCAGCACCACCCGGCAGCTTCGGGCCGGAGCCGGTGCGCGTGTCCCA
GCTCGACGGCGCCCGACTGATGCTACTGGAGCGCGGCCATTGCCTGCAACGCCACGCGCTGAGCGCCTTCCCCGACCACG
ACATCCAACAGGACGAGAGCTTTTCGGCGACGTCGCTATCGACCTTGATCTCGATGGTCAGTGAAGGATTGGGCATCACC
CTGCTGCCGGATCTGGCGCTCGACGCCGGCGTTCTCGGCGGACAGAACGTGGCGATCGCGCCGCTGCCGGACGCCTGTCC
GCGCAAGGTGGTGCTGGCGTGGCGAACGACCTCCGCCCGCGCCGAACTGTTCCGCAGCCTCGGCGACATCTTCCGGCGCA
CCCGCGGTCTAGTCCGCCCGCCGCGCTGA

Upstream 100 bases:

>100_bases
GTCTCCTGGTGATCGGGATGTCCCGAGCACCTCGGATGTATGCGAGGCTGACTGATTGGAGAAATTGATTATATTTCTTT
CTGTGATAGACTAACTCTAT

Downstream 100 bases:

>100_bases
GGCGGCCGCATCGACCTTGACTCGAATTCATGCAACTGCATTTAATCGCGGGATAAGTCCCATCTCCCCGAGGAGGAAGC
CGTCCATGAAACTGTATTAT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Esterase operon transcriptional regulator [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNTNITLRQLGFLVAVADTLNFSRAAEQCFVTQPTLSAGLKELEDRLGVVLAERTKRSVLLTPVGAVIAARARAVLLAAR
EIETLAATQAAPDTGDLRLGAIPTIGPYLIPRALPEIRRAFPGLRLLMREEMTEPLLDGLHHGRLDLILFALPFETSGIE
IMELFEDGYHLAAPPGSFGPEPVRVSQLDGARLMLLERGHCLQRHALSAFPDHDIQQDESFSATSLSTLISMVSEGLGIT
LLPDLALDAGVLGGQNVAIAPLPDACPRKVVLAWRTTSARAELFRSLGDIFRRTRGLVRPPR

Sequences:

>Translated_302_residues
MNTNITLRQLGFLVAVADTLNFSRAAEQCFVTQPTLSAGLKELEDRLGVVLAERTKRSVLLTPVGAVIAARARAVLLAAR
EIETLAATQAAPDTGDLRLGAIPTIGPYLIPRALPEIRRAFPGLRLLMREEMTEPLLDGLHHGRLDLILFALPFETSGIE
IMELFEDGYHLAAPPGSFGPEPVRVSQLDGARLMLLERGHCLQRHALSAFPDHDIQQDESFSATSLSTLISMVSEGLGIT
LLPDLALDAGVLGGQNVAIAPLPDACPRKVVLAWRTTSARAELFRSLGDIFRRTRGLVRPPR
>Mature_302_residues
MNTNITLRQLGFLVAVADTLNFSRAAEQCFVTQPTLSAGLKELEDRLGVVLAERTKRSVLLTPVGAVIAARARAVLLAAR
EIETLAATQAAPDTGDLRLGAIPTIGPYLIPRALPEIRRAFPGLRLLMREEMTEPLLDGLHHGRLDLILFALPFETSGIE
IMELFEDGYHLAAPPGSFGPEPVRVSQLDGARLMLLERGHCLQRHALSAFPDHDIQQDESFSATSLSTLISMVSEGLGIT
LLPDLALDAGVLGGQNVAIAPLPDACPRKVVLAWRTTSARAELFRSLGDIFRRTRGLVRPPR

Specific function: Transcriptional regulator of the esterase operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=245, Percent_Identity=40.4081632653061, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1788887, Length=280, Percent_Identity=29.2857142857143, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788748, Length=302, Percent_Identity=25.8278145695364, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787879, Length=155, Percent_Identity=36.1290322580645, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788481, Length=290, Percent_Identity=27.2413793103448, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI2367136, Length=286, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787530, Length=257, Percent_Identity=26.0700389105058, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI157672245, Length=298, Percent_Identity=26.510067114094, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI145693105, Length=243, Percent_Identity=25.1028806584362, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787806, Length=272, Percent_Identity=23.8970588235294, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1788297, Length=243, Percent_Identity=23.4567901234568, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32758; Mature: 32758

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNITLRQLGFLVAVADTLNFSRAAEQCFVTQPTLSAGLKELEDRLGVVLAERTKRSVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCEEE
LTPVGAVIAARARAVLLAAREIETLAATQAAPDTGDLRLGAIPTIGPYLIPRALPEIRRA
ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
FPGLRLLMREEMTEPLLDGLHHGRLDLILFALPFETSGIEIMELFEDGYHLAAPPGSFGP
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEECCCCCCCC
EPVRVSQLDGARLMLLERGHCLQRHALSAFPDHDIQQDESFSATSLSTLISMVSEGLGIT
CCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE
LLPDLALDAGVLGGQNVAIAPLPDACPRKVVLAWRTTSARAELFRSLGDIFRRTRGLVRP
EECHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC
PR
CC
>Mature Secondary Structure
MNTNITLRQLGFLVAVADTLNFSRAAEQCFVTQPTLSAGLKELEDRLGVVLAERTKRSVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCEEE
LTPVGAVIAARARAVLLAAREIETLAATQAAPDTGDLRLGAIPTIGPYLIPRALPEIRRA
ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
FPGLRLLMREEMTEPLLDGLHHGRLDLILFALPFETSGIEIMELFEDGYHLAAPPGSFGP
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEECCCCCCCC
EPVRVSQLDGARLMLLERGHCLQRHALSAFPDHDIQQDESFSATSLSTLISMVSEGLGIT
CCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE
LLPDLALDAGVLGGQNVAIAPLPDACPRKVVLAWRTTSARAELFRSLGDIFRRTRGLVRP
EECHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC
PR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA