| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is qorA [H]
Identifier: 86751592
GI number: 86751592
Start: 5081241
End: 5082239
Strand: Direct
Name: qorA [H]
Synonym: RPB_4494
Alternate gene names: 86751592
Gene position: 5081241-5082239 (Clockwise)
Preceding gene: 86751589
Following gene: 86751593
Centisome position: 95.3
GC content: 67.77
Gene sequence:
>999_bases ATGGAACCGGTCCCTTCGCAAATGACCGTGATCGGGATCAGCAAGCCCGGCGGACCCGAGGTGCTGCTGCCGGAAACGCG CGCCGTGCCCACGCCCGGCCCCGGTGAAATCCTGGTCAAGGTCGCGGCGGCCGGGGTCAACCGTCCCGATGTGGCACAGC GCTCCGGCAGCTATCCGCCGCCGCCCGGCGCCAGCGACCTGCCCGGCCTGGAGATCGCCGGCGAGGTGGTGGCGATCGGC GACGGCGCGACCCGGCACAAGCTCGGCGACAAGGTGATGTCGCTGGTCGCCGGCGGCGGCTATGCCGAATATTGCATCGC GCAGGATGCCCAGGCGATGACGGTGCCGGCCGGCTTCTCGATGATCGAGGCCGGCGCCACGCCGGAGACGCTGATGACGG TGTGGCACAACGTGTTCGAGCGCGGCGCGCTGCAGCCCGGCGAAACCCTGCTGGTGCATGGCGGCTCGTCCGGCATCGGC ACGATGGCGATCCAGCTCGCGGTCGCATTTGGCGCCAAGGTGATCGCCACCGTCGGCGCGCCCGACAAGGCCGAGGCCTG CCTGAAACTCGGCGCCACCCGGGCGATCAACTACAAGACCGAGGATTTCGTCGCAGCCGTCAAGGAAACGACCAGCGGCA AGGGCGCCGACGTGATCCTCGACATGGTCGGCGGCGACTACATCGAGCGCAATTACGATGCCGCCGCAATGGACGGCCGG ATCGTCCAGATTGCGTTCCTCGGCGGCGCCAAGACCACGGTGAATTTCACCAAGCTGATGATCAAGCGGCTGCACCACAC CGGTTCGACGCTGCGGCCGCGCAGCAATGCCGACAAGGCCGCGATGGTCGCCGCGATCGAGACCAGGGTGATGCCGCTGC TCGCCGAAGGCCGGATCAAGCCGCTGATCGACGGCACCTTCGCGTTGCAAGACGCCGCCGCCGCCCACCGGCGGATGGAG ACCAGCCAACATATTGGCAAAATTGTGTTGACGGTCTGA
Upstream 100 bases:
>100_bases CGCCGTTCGTGATCCGGTCCGGTTGCCAGCCGCGCCGCGGCTGTCTAATCAGGCTGTCTCATCAGATGGCACCCGCCACC CCGCCAGCCAAGGACAAATC
Downstream 100 bases:
>100_bases ATCGGTCCCCGGTTGTTACGCCTATGTTTTCTCCGGGTTTCATGTCATTTATCCGTCGTCGGACACGCGCGGGGGCCGCG CTTCCAGACCGGTGTGAACG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MEPVPSQMTVIGISKPGGPEVLLPETRAVPTPGPGEILVKVAAAGVNRPDVAQRSGSYPPPPGASDLPGLEIAGEVVAIG DGATRHKLGDKVMSLVAGGGYAEYCIAQDAQAMTVPAGFSMIEAGATPETLMTVWHNVFERGALQPGETLLVHGGSSGIG TMAIQLAVAFGAKVIATVGAPDKAEACLKLGATRAINYKTEDFVAAVKETTSGKGADVILDMVGGDYIERNYDAAAMDGR IVQIAFLGGAKTTVNFTKLMIKRLHHTGSTLRPRSNADKAAMVAAIETRVMPLLAEGRIKPLIDGTFALQDAAAAHRRME TSQHIGKIVLTV
Sequences:
>Translated_332_residues MEPVPSQMTVIGISKPGGPEVLLPETRAVPTPGPGEILVKVAAAGVNRPDVAQRSGSYPPPPGASDLPGLEIAGEVVAIG DGATRHKLGDKVMSLVAGGGYAEYCIAQDAQAMTVPAGFSMIEAGATPETLMTVWHNVFERGALQPGETLLVHGGSSGIG TMAIQLAVAFGAKVIATVGAPDKAEACLKLGATRAINYKTEDFVAAVKETTSGKGADVILDMVGGDYIERNYDAAAMDGR IVQIAFLGGAKTTVNFTKLMIKRLHHTGSTLRPRSNADKAAMVAAIETRVMPLLAEGRIKPLIDGTFALQDAAAAHRRME TSQHIGKIVLTV >Mature_332_residues MEPVPSQMTVIGISKPGGPEVLLPETRAVPTPGPGEILVKVAAAGVNRPDVAQRSGSYPPPPGASDLPGLEIAGEVVAIG DGATRHKLGDKVMSLVAGGGYAEYCIAQDAQAMTVPAGFSMIEAGATPETLMTVWHNVFERGALQPGETLLVHGGSSGIG TMAIQLAVAFGAKVIATVGAPDKAEACLKLGATRAINYKTEDFVAAVKETTSGKGADVILDMVGGDYIERNYDAAAMDGR IVQIAFLGGAKTTVNFTKLMIKRLHHTGSTLRPRSNADKAAMVAAIETRVMPLLAEGRIKPLIDGTFALQDAAAAHRRME TSQHIGKIVLTV
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=332, Percent_Identity=40.9638554216867, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI22538444, Length=332, Percent_Identity=40.9638554216867, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI194239674, Length=326, Percent_Identity=30.0613496932515, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI13236495, Length=326, Percent_Identity=30.0613496932515, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI18379349, Length=311, Percent_Identity=28.6173633440514, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI24308257, Length=344, Percent_Identity=26.1627906976744, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI194239676, Length=203, Percent_Identity=34.4827586206897, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI28557745, Length=334, Percent_Identity=32.0359281437126, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI41872631, Length=319, Percent_Identity=28.5266457680251, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI47519420, Length=378, Percent_Identity=27.5132275132275, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI197927207, Length=197, Percent_Identity=25.3807106598985, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=36.3914373088685, Blast_Score=148, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17507255, Length=318, Percent_Identity=26.1006289308176, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI212642053, Length=313, Percent_Identity=25.5591054313099, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71987554, Length=180, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=336, Percent_Identity=28.2738095238095, Blast_Score=99, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6323961, Length=331, Percent_Identity=25.0755287009063, Blast_Score=89, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6319621, Length=331, Percent_Identity=25.6797583081571, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324486, Length=337, Percent_Identity=23.7388724035608, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581345, Length=301, Percent_Identity=28.9036544850498, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI19920632, Length=301, Percent_Identity=28.2392026578073, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI221330659, Length=301, Percent_Identity=28.2392026578073, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI45550423, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34441; Mature: 34441
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPVPSQMTVIGISKPGGPEVLLPETRAVPTPGPGEILVKVAAAGVNRPDVAQRSGSYPP CCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCHHEEEEEECCCCCCCCHHHHCCCCCC PPGASDLPGLEIAGEVVAIGDGATRHKLGDKVMSLVAGGGYAEYCIAQDAQAMTVPAGFS CCCCCCCCCCEECCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCH MIEAGATPETLMTVWHNVFERGALQPGETLLVHGGSSGIGTMAIQLAVAFGAKVIATVGA HHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCC PDKAEACLKLGATRAINYKTEDFVAAVKETTSGKGADVILDMVGGDYIERNYDAAAMDGR CHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCCCCCCCE IVQIAFLGGAKTTVNFTKLMIKRLHHTGSTLRPRSNADKAAMVAAIETRVMPLLAEGRIK EEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC PLIDGTFALQDAAAAHRRMETSQHIGKIVLTV EEECCHHHHHHHHHHHHHHHHHHHHCEEEEEC >Mature Secondary Structure MEPVPSQMTVIGISKPGGPEVLLPETRAVPTPGPGEILVKVAAAGVNRPDVAQRSGSYPP CCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCHHEEEEEECCCCCCCCHHHHCCCCCC PPGASDLPGLEIAGEVVAIGDGATRHKLGDKVMSLVAGGGYAEYCIAQDAQAMTVPAGFS CCCCCCCCCCEECCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCH MIEAGATPETLMTVWHNVFERGALQPGETLLVHGGSSGIGTMAIQLAVAFGAKVIATVGA HHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCC PDKAEACLKLGATRAINYKTEDFVAAVKETTSGKGADVILDMVGGDYIERNYDAAAMDGR CHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCCCCCCCE IVQIAFLGGAKTTVNFTKLMIKRLHHTGSTLRPRSNADKAAMVAAIETRVMPLLAEGRIK EEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC PLIDGTFALQDAAAAHRRMETSQHIGKIVLTV EEECCHHHHHHHHHHHHHHHHHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]