| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is nreB [H]
Identifier: 86751551
GI number: 86751551
Start: 5039903
End: 5041033
Strand: Direct
Name: nreB [H]
Synonym: RPB_4453
Alternate gene names: 86751551
Gene position: 5039903-5041033 (Clockwise)
Preceding gene: 86751550
Following gene: 86751552
Centisome position: 94.53
GC content: 63.75
Gene sequence:
>1131_bases ATGAGTAGGCTCGCGACCAGGATTCTGCTGGTCGACGACGCGCAGATTGAATGTCTCGCTTTCGAGCGCCAGTTACACAA GATTCCCTTCCACCGCCTGCAACTGGATTGGGTCTCGACCTATGCCGATGCGCTCGTGGCGTTCGATCGCGACCAGCACG ATTTGTATTTCGTCGATTTCCGGCTCGGTCCGGACAACGGCCTCGATCTCGTGCGTCGTGCACGAGTGAACGGAATGACG AAGCCGATCATCGTGTTGACCGGCCACGGCAGCGCGGCGGTCGACAAGGCGGCGACCGACGCTGGCGCCAACGATTATCT GGTGAAGGGGGAGTTCGACGCGGTGCTGCTCGAGCGGTCGATTCGTTATGCCTCGCGCAACGCCGACGCGCTTGCGGAGG TGGGACGCCGCCTGGTCGAAAGCAGGGCGACCGCCCGCGAACTAATGGAGCAGACCAAGCGGCGCGCCGCCGCCGAGGCG GATGTTCTCCAGGTGCTCAGACAGACGATGACGGACCAGGAGGCCGAGCGTCAGCGGATTGCCCGGGAAATGCACGACAA TCTCGGCCAGTCGGTAACGCTGGTTCAGCTCGGCCTCGACTCGATCGCACGCAGCGCGTCGGCGCAGAGCGACATCGCGA GCAAGGCCGCGTCGTTGAAACGCATCACGCACGATATGAGTAGGAGCCTGCATCGGATCGCCTGGGAGGTCCGCCCGACG GCGCTCGATGCACTCGGCCTGGAGGACGCGATCGGCCAGCTCGTCGCCGAGTGGGAGCCGCATTGCAGCCTGTGCTTCGA TCTTCACTTCGGGCTCGGCGACCGGAGGTTGCCGCCTGATGTCGAAAGCGCCCTGTATCGCGTAATTCAGGAAGGCATCA CCAACGTGGTGCGCCACGCAAAGGCGACCCGGGTCGGGGTGATCCTGGAGATGCGGGGCAACGAACTGATCTGCATCGTC GAAGACGATGGCTGCGGTGTGCCCGAGGTCGAGTCGGGCGTCGCTGAAAAAACGTCGCGTCGACTGGGCCTGCTGGGTAT GCGCGAGCGGCTGGCTCTCGTCAATGGAACGGTCGAACTCGAATCTCATCCAGAAAAGGGCACGGCGGTGTTCGCGCGCG TGCCGCTCTAG
Upstream 100 bases:
>100_bases GTCAAGCCGGCCAGTATCCCCGACTACGTCTCCGCGATCGAATCGCTCTGGCAATTCTGGATGAAGACTGCGTCTCTGCC GATGACGGAGAGGTTCGGCC
Downstream 100 bases:
>100_bases GTGAACATGCTCAAGCAAGACCTTGTGCCGCAATTCCTGACACCGGAACCCCGCCGACCGAGTCGTCAGGGGCTGACCCG GATGTGCCTGCTCCTGCACC
Product: response regulator receiver sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Nitrogen regulation protein B [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSRLATRILLVDDAQIECLAFERQLHKIPFHRLQLDWVSTYADALVAFDRDQHDLYFVDFRLGPDNGLDLVRRARVNGMT KPIIVLTGHGSAAVDKAATDAGANDYLVKGEFDAVLLERSIRYASRNADALAEVGRRLVESRATARELMEQTKRRAAAEA DVLQVLRQTMTDQEAERQRIAREMHDNLGQSVTLVQLGLDSIARSASAQSDIASKAASLKRITHDMSRSLHRIAWEVRPT ALDALGLEDAIGQLVAEWEPHCSLCFDLHFGLGDRRLPPDVESALYRVIQEGITNVVRHAKATRVGVILEMRGNELICIV EDDGCGVPEVESGVAEKTSRRLGLLGMRERLALVNGTVELESHPEKGTAVFARVPL
Sequences:
>Translated_376_residues MSRLATRILLVDDAQIECLAFERQLHKIPFHRLQLDWVSTYADALVAFDRDQHDLYFVDFRLGPDNGLDLVRRARVNGMT KPIIVLTGHGSAAVDKAATDAGANDYLVKGEFDAVLLERSIRYASRNADALAEVGRRLVESRATARELMEQTKRRAAAEA DVLQVLRQTMTDQEAERQRIAREMHDNLGQSVTLVQLGLDSIARSASAQSDIASKAASLKRITHDMSRSLHRIAWEVRPT ALDALGLEDAIGQLVAEWEPHCSLCFDLHFGLGDRRLPPDVESALYRVIQEGITNVVRHAKATRVGVILEMRGNELICIV EDDGCGVPEVESGVAEKTSRRLGLLGMRERLALVNGTVELESHPEKGTAVFARVPL >Mature_375_residues SRLATRILLVDDAQIECLAFERQLHKIPFHRLQLDWVSTYADALVAFDRDQHDLYFVDFRLGPDNGLDLVRRARVNGMTK PIIVLTGHGSAAVDKAATDAGANDYLVKGEFDAVLLERSIRYASRNADALAEVGRRLVESRATARELMEQTKRRAAAEAD VLQVLRQTMTDQEAERQRIAREMHDNLGQSVTLVQLGLDSIARSASAQSDIASKAASLKRITHDMSRSLHRIAWEVRPTA LDALGLEDAIGQLVAEWEPHCSLCFDLHFGLGDRRLPPDVESALYRVIQEGITNVVRHAKATRVGVILEMRGNELICIVE DDGCGVPEVESGVAEKTSRRLGLLGMRERLALVNGTVELESHPEKGTAVFARVPL
Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxyg
COG id: COG4564
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=231, Percent_Identity=29.004329004329, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787474, Length=195, Percent_Identity=25.1282051282051, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR011712 - InterPro: IPR005467 - InterPro: IPR017203 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 41669; Mature: 41538
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLATRILLVDDAQIECLAFERQLHKIPFHRLQLDWVSTYADALVAFDRDQHDLYFVDF CCCHHEEEEEEECCCHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHCCCCCCCEEEEEE RLGPDNGLDLVRRARVNGMTKPIIVLTGHGSAAVDKAATDAGANDYLVKGEFDAVLLERS EECCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHH IRYASRNADALAEVGRRLVESRATARELMEQTKRRAAAEADVLQVLRQTMTDQEAERQRI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AREMHDNLGQSVTLVQLGLDSIARSASAQSDIASKAASLKRITHDMSRSLHRIAWEVRPT HHHHHHHHCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ALDALGLEDAIGQLVAEWEPHCSLCFDLHFGLGDRRLPPDVESALYRVIQEGITNVVRHA HHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KATRVGVILEMRGNELICIVEDDGCGVPEVESGVAEKTSRRLGLLGMRERLALVNGTVEL HHHHEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE ESHPEKGTAVFARVPL CCCCCCCCEEEEECCC >Mature Secondary Structure SRLATRILLVDDAQIECLAFERQLHKIPFHRLQLDWVSTYADALVAFDRDQHDLYFVDF CCHHEEEEEEECCCHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHCCCCCCCEEEEEE RLGPDNGLDLVRRARVNGMTKPIIVLTGHGSAAVDKAATDAGANDYLVKGEFDAVLLERS EECCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHH IRYASRNADALAEVGRRLVESRATARELMEQTKRRAAAEADVLQVLRQTMTDQEAERQRI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AREMHDNLGQSVTLVQLGLDSIARSASAQSDIASKAASLKRITHDMSRSLHRIAWEVRPT HHHHHHHHCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ALDALGLEDAIGQLVAEWEPHCSLCFDLHFGLGDRRLPPDVESALYRVIQEGITNVVRHA HHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KATRVGVILEMRGNELICIVEDDGCGVPEVESGVAEKTSRRLGLLGMRERLALVNGTVEL HHHHEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE ESHPEKGTAVFARVPL CCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12426351 [H]