| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is thrC [H]
Identifier: 86751521
GI number: 86751521
Start: 5006990
End: 5008252
Strand: Reverse
Name: thrC [H]
Synonym: RPB_4420
Alternate gene names: 86751521
Gene position: 5008252-5006990 (Counterclockwise)
Preceding gene: 86751522
Following gene: 86751520
Centisome position: 93.93
GC content: 67.78
Gene sequence:
>1263_bases ATGGCAAAGGTCAAAGGGCTGCAGTGCCTGCGCTGCGGCGCCCTTTATGCCCCGGATCATTACGCCGAGGACTGCCCGGC CTGCCGGCCGGTGGTGCGGAGCAATCTCATCGTCGTCTACGATGAGCCGCTCGCCTTGCGCAAGCCGGACGCGGCCGGCG CCGGGCCGTCGAGCGGCCTGTGGCGCTACGGCGACGTGCTGCCGGTGAGCGAGGCCGACGCCGTGTCGCTCGGCGAGGGC GGTTCGCCGCTCCGCCAACTGCGCGCGGTGGGCGATCAACTCGGTCTCAAACGGCTCTACGGCAAGGACGAGAGCGGCAA TCCGACCTGGTCGTTCAAGGACCGTCTCGCCTGCATCGCGGTGTCGGTCGCCAAGCAGATGGGCGCCAAGACTATCGTGT CGAGTTCATCCGGCAACGCCGGCGCCGCCGCCGCCGCTTATGCGGCGAAAGCCGGCATCCCCTGCGTGGTGTTCACGTTC GGCTGGGCCGCAGGTCCGATGGTGACGCAGATGCGCGCCTATGGGGCCAAGGTCGTCACCGTGCCGCAGAAGGAAGACCG CTGGCGGTTCATGGAGCACGCCGTGCGGCAGTATGGCTGGTTTCCGACTTCGCCGTTTTTCGGCCCGGCCGTCGGCTCCA ATCCTTACGGCATCGAAGGCTACAAGACGCTGGCCTACGAGACCGTCGAGCAGCTCGGCTGGCGGGCCCCGGATTGGTGC ATCCTGCCGGTGTGCTACGGCGACGCGCTGATCGGGATGTGGCGCGGCTTCACCGAGATGAAGGCGGCGGGCTGGATCGA TCGGATGCCGAAGATGGTCGCCGCGGAGGTCTACGGCTCGATCGGCCGGGCGCTCGACGACGACCTCGAAGCGCCGCCGG CGATGCCGAAGACCTTCGACACGGTGTCGGGCTCGATCGGCGCCGTGCAGGGCACCTATCAGGCGCTCGAGATCGTGCGA AAATCCGGCGGCCGAGCGGTGACGATCTCCAACGACGACACCATGCGATGGCAGCGTCTGCTGGCGACGCGTGAGGCCCG CTATCTCGAGCCGGCGTCCGCCGGCGGACTGGTCGCGGTCGAGCGGCTCGCAAAATCGGGAATCATCAAGCCGGACGACG TCGTCGTCTCGCTGCTCACGGCGTCGGGTCTGAAAGACCCGGCGGTCACTGCCGCCACCCAGGGCGACACCATGGCGGTG CCGTCCGATCTGTCGGCAGCCTGGCAAATCCTGCAATCGGCGGGAATAGTTCCAAGCAACTGA
Upstream 100 bases:
>100_bases AGATCGGTTACGCCGGTCTGCAGGTCGAGGACACGCTGGTCGTCACCAAGGACGGCGTCGAGTCGTTCATGCTGTCGAAC ACGGCGCTGCGGGTGCTCTG
Downstream 100 bases:
>100_bases GGCGAGATGGAGATGGACATGAAATCGAAAATCGTCGGAGCTGTCGGTCTGGTGTTGGCGGCGCTCCTGCCGCAGGCGGC GGCCGCGGACTATCCCGACA
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MAKVKGLQCLRCGALYAPDHYAEDCPACRPVVRSNLIVVYDEPLALRKPDAAGAGPSSGLWRYGDVLPVSEADAVSLGEG GSPLRQLRAVGDQLGLKRLYGKDESGNPTWSFKDRLACIAVSVAKQMGAKTIVSSSSGNAGAAAAAYAAKAGIPCVVFTF GWAAGPMVTQMRAYGAKVVTVPQKEDRWRFMEHAVRQYGWFPTSPFFGPAVGSNPYGIEGYKTLAYETVEQLGWRAPDWC ILPVCYGDALIGMWRGFTEMKAAGWIDRMPKMVAAEVYGSIGRALDDDLEAPPAMPKTFDTVSGSIGAVQGTYQALEIVR KSGGRAVTISNDDTMRWQRLLATREARYLEPASAGGLVAVERLAKSGIIKPDDVVVSLLTASGLKDPAVTAATQGDTMAV PSDLSAAWQILQSAGIVPSN
Sequences:
>Translated_420_residues MAKVKGLQCLRCGALYAPDHYAEDCPACRPVVRSNLIVVYDEPLALRKPDAAGAGPSSGLWRYGDVLPVSEADAVSLGEG GSPLRQLRAVGDQLGLKRLYGKDESGNPTWSFKDRLACIAVSVAKQMGAKTIVSSSSGNAGAAAAAYAAKAGIPCVVFTF GWAAGPMVTQMRAYGAKVVTVPQKEDRWRFMEHAVRQYGWFPTSPFFGPAVGSNPYGIEGYKTLAYETVEQLGWRAPDWC ILPVCYGDALIGMWRGFTEMKAAGWIDRMPKMVAAEVYGSIGRALDDDLEAPPAMPKTFDTVSGSIGAVQGTYQALEIVR KSGGRAVTISNDDTMRWQRLLATREARYLEPASAGGLVAVERLAKSGIIKPDDVVVSLLTASGLKDPAVTAATQGDTMAV PSDLSAAWQILQSAGIVPSN >Mature_419_residues AKVKGLQCLRCGALYAPDHYAEDCPACRPVVRSNLIVVYDEPLALRKPDAAGAGPSSGLWRYGDVLPVSEADAVSLGEGG SPLRQLRAVGDQLGLKRLYGKDESGNPTWSFKDRLACIAVSVAKQMGAKTIVSSSSGNAGAAAAAYAAKAGIPCVVFTFG WAAGPMVTQMRAYGAKVVTVPQKEDRWRFMEHAVRQYGWFPTSPFFGPAVGSNPYGIEGYKTLAYETVEQLGWRAPDWCI LPVCYGDALIGMWRGFTEMKAAGWIDRMPKMVAAEVYGSIGRALDDDLEAPPAMPKTFDTVSGSIGAVQGTYQALEIVRK SGGRAVTISNDDTMRWQRLLATREARYLEPASAGGLVAVERLAKSGIIKPDDVVVSLLTASGLKDPAVTAATQGDTMAVP SDLSAAWQILQSAGIVPSN
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 44690; Mature: 44558
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVKGLQCLRCGALYAPDHYAEDCPACRPVVRSNLIVVYDEPLALRKPDAAGAGPSSGL CCCCCCCHHHHCCCCCCCCCCHHCCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCC WRYGDVLPVSEADAVSLGEGGSPLRQLRAVGDQLGLKRLYGKDESGNPTWSFKDRLACIA CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VSVAKQMGAKTIVSSSSGNAGAAAAAYAAKAGIPCVVFTFGWAAGPMVTQMRAYGAKVVT HHHHHHHCCHHEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEE VPQKEDRWRFMEHAVRQYGWFPTSPFFGPAVGSNPYGIEGYKTLAYETVEQLGWRAPDWC CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE ILPVCYGDALIGMWRGFTEMKAAGWIDRMPKMVAAEVYGSIGRALDDDLEAPPAMPKTFD EEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH TVSGSIGAVQGTYQALEIVRKSGGRAVTISNDDTMRWQRLLATREARYLEPASAGGLVAV HCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH ERLAKSGIIKPDDVVVSLLTASGLKDPAVTAATQGDTMAVPSDLSAAWQILQSAGIVPSN HHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AKVKGLQCLRCGALYAPDHYAEDCPACRPVVRSNLIVVYDEPLALRKPDAAGAGPSSGL CCCCCCHHHHCCCCCCCCCCHHCCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCC WRYGDVLPVSEADAVSLGEGGSPLRQLRAVGDQLGLKRLYGKDESGNPTWSFKDRLACIA CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VSVAKQMGAKTIVSSSSGNAGAAAAAYAAKAGIPCVVFTFGWAAGPMVTQMRAYGAKVVT HHHHHHHCCHHEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEE VPQKEDRWRFMEHAVRQYGWFPTSPFFGPAVGSNPYGIEGYKTLAYETVEQLGWRAPDWC CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE ILPVCYGDALIGMWRGFTEMKAAGWIDRMPKMVAAEVYGSIGRALDDDLEAPPAMPKTFD EEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH TVSGSIGAVQGTYQALEIVRKSGGRAVTISNDDTMRWQRLLATREARYLEPASAGGLVAV HCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH ERLAKSGIIKPDDVVVSLLTASGLKDPAVTAATQGDTMAVPSDLSAAWQILQSAGIVPSN HHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]