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The map label for this gene is 86751520

Identifier: 86751520

GI number: 86751520

Start: 5006018

End: 5006983

Strand: Reverse

Name: 86751520

Synonym: RPB_4419

Alternate gene names: NA

Gene position: 5006983-5006018 (Counterclockwise)

Preceding gene: 86751521

Following gene: 86751519

Centisome position: 93.91

GC content: 65.53

Gene sequence:

>966_bases
ATGGAGATGGACATGAAATCGAAAATCGTCGGAGCTGTCGGTCTGGTGTTGGCGGCGCTCCTGCCGCAGGCGGCGGCCGC
GGACTATCCCGACAAGCCGATCACGCTGATCGTTCCGTGGGCCGCCGGAGGCAGCACCGACCAGACCGCGCGCGTGCTGG
CCAAGGCGGCCGAAGCCTCGCTCGGCCAGACCATCGTGGTGATCAACCAGCCGGGCGCCTCGACCTCGATCGGCATGGCC
GCCCTCGCCAAAGCCCAGCCGGACGGCTACACGATCGGCACGCTGTCCAGCACCAGCTATCTGGCCGCGTTGCAGGGACG
TCAGCTACCCTTCGACCCGATCAACGCGTTTTCGTACATCAGCTACTATGGCGACAATCTGATCGGCATCGCCGTGAAGG
CCGATGCGCGCTGGAAGACGATCGACGATCTGATCGCCGAGGGCAAGGCGAAGCCGGGAGCGATCAAGTACGGCACCGCC
GGCGTCGGCACCACCCAGCATCTCACCAGCGAGGCGCTGCAATTCGCCACCAAGGCGAAGTTCGTCCATGTGCCGCAGCA
GGGCTCCGCGGCCTCGGTGCCGGCGCTGCTCGGCGGCCACGTCGACTTCATCATGGAGACGTCGGTCTGGGCGCCTTTCA
TCGAGAGCAAGGAAGTGCGGCTGCTCGCGGTCACCACGCCGCAGCGCTCGAAATCGTATCCGGACGTGCCGAGCCTGTCG
GAGAAGGGTCTCAAATCGCTGCGGTCGGTGCAGGCGATCATCGGACCGGCCGGGATGCCGGAAGACGTGCGCATGAAGCT
CGAAACCGCCTTCCGCAAGGCGATGAGCGACAAGACGTTCCAGGACACGATGGAGCGGCTCGGCATGGTGCCGCTCGACC
TGCCGGGTGCCGAGGTCAAGAAGCTGGTCGAGGGCGAATACGCCTCGGCGCGCGAAATCCTGCAGGACATCGGCAAGGCG
AAATGA

Upstream 100 bases:

>100_bases
TGCCGCCACCCAGGGCGACACCATGGCGGTGCCGTCCGATCTGTCGGCAGCCTGGCAAATCCTGCAATCGGCGGGAATAG
TTCCAAGCAACTGAGGCGAG

Downstream 100 bases:

>100_bases
GCCGCCCCATCGCCATGGCACGGCTGACGACGCCGACCTACGTGGCGGTCCTGATGCTGCTGGCGCTGGCGCTGACCTTC
GGGCTCGGCGCCTTCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MEMDMKSKIVGAVGLVLAALLPQAAAADYPDKPITLIVPWAAGGSTDQTARVLAKAAEASLGQTIVVINQPGASTSIGMA
ALAKAQPDGYTIGTLSSTSYLAALQGRQLPFDPINAFSYISYYGDNLIGIAVKADARWKTIDDLIAEGKAKPGAIKYGTA
GVGTTQHLTSEALQFATKAKFVHVPQQGSAASVPALLGGHVDFIMETSVWAPFIESKEVRLLAVTTPQRSKSYPDVPSLS
EKGLKSLRSVQAIIGPAGMPEDVRMKLETAFRKAMSDKTFQDTMERLGMVPLDLPGAEVKKLVEGEYASAREILQDIGKA
K

Sequences:

>Translated_321_residues
MEMDMKSKIVGAVGLVLAALLPQAAAADYPDKPITLIVPWAAGGSTDQTARVLAKAAEASLGQTIVVINQPGASTSIGMA
ALAKAQPDGYTIGTLSSTSYLAALQGRQLPFDPINAFSYISYYGDNLIGIAVKADARWKTIDDLIAEGKAKPGAIKYGTA
GVGTTQHLTSEALQFATKAKFVHVPQQGSAASVPALLGGHVDFIMETSVWAPFIESKEVRLLAVTTPQRSKSYPDVPSLS
EKGLKSLRSVQAIIGPAGMPEDVRMKLETAFRKAMSDKTFQDTMERLGMVPLDLPGAEVKKLVEGEYASAREILQDIGKA
K
>Mature_321_residues
MEMDMKSKIVGAVGLVLAALLPQAAAADYPDKPITLIVPWAAGGSTDQTARVLAKAAEASLGQTIVVINQPGASTSIGMA
ALAKAQPDGYTIGTLSSTSYLAALQGRQLPFDPINAFSYISYYGDNLIGIAVKADARWKTIDDLIAEGKAKPGAIKYGTA
GVGTTQHLTSEALQFATKAKFVHVPQQGSAASVPALLGGHVDFIMETSVWAPFIESKEVRLLAVTTPQRSKSYPDVPSLS
EKGLKSLRSVQAIIGPAGMPEDVRMKLETAFRKAMSDKTFQDTMERLGMVPLDLPGAEVKKLVEGEYASAREILQDIGKA
K

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064
- InterPro:   IPR006311 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33948; Mature: 33948

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMDMKSKIVGAVGLVLAALLPQAAAADYPDKPITLIVPWAAGGSTDQTARVLAKAAEAS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHC
LGQTIVVINQPGASTSIGMAALAKAQPDGYTIGTLSSTSYLAALQGRQLPFDPINAFSYI
CCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHH
SYYGDNLIGIAVKADARWKTIDDLIAEGKAKPGAIKYGTAGVGTTQHLTSEALQFATKAK
HHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
FVHVPQQGSAASVPALLGGHVDFIMETSVWAPFIESKEVRLLAVTTPQRSKSYPDVPSLS
EEECCCCCCCCCCHHHHCCCHHEEEHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHH
EKGLKSLRSVQAIIGPAGMPEDVRMKLETAFRKAMSDKTFQDTMERLGMVPLDLPGAEVK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHH
KLVEGEYASAREILQDIGKAK
HHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEMDMKSKIVGAVGLVLAALLPQAAAADYPDKPITLIVPWAAGGSTDQTARVLAKAAEAS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHC
LGQTIVVINQPGASTSIGMAALAKAQPDGYTIGTLSSTSYLAALQGRQLPFDPINAFSYI
CCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHH
SYYGDNLIGIAVKADARWKTIDDLIAEGKAKPGAIKYGTAGVGTTQHLTSEALQFATKAK
HHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
FVHVPQQGSAASVPALLGGHVDFIMETSVWAPFIESKEVRLLAVTTPQRSKSYPDVPSLS
EEECCCCCCCCCCHHHHCCCHHEEEHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHH
EKGLKSLRSVQAIIGPAGMPEDVRMKLETAFRKAMSDKTFQDTMERLGMVPLDLPGAEVK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHH
KLVEGEYASAREILQDIGKAK
HHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7851418 [H]