| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is luxA [H]
Identifier: 86751512
GI number: 86751512
Start: 4998035
End: 4999042
Strand: Reverse
Name: luxA [H]
Synonym: RPB_4411
Alternate gene names: 86751512
Gene position: 4999042-4998035 (Counterclockwise)
Preceding gene: 86751513
Following gene: 86751511
Centisome position: 93.76
GC content: 64.58
Gene sequence:
>1008_bases ATGAAGTTCAGTGTCTGTCTGTCGACCGGATTCGAAGGCGTGATGTATCCGATCCCGTTCGCGGGGCCGGAGGATTTCAT CGCCCAGGCGCAGCTCTGCGAGCGCCTCGGCTATGATTCGGTGTGGGGCAACGATCACATCACCACCCAGAACTACGTCC GCGAACTGTTTCCCGGCAAGCCGCCGAACTTCTACGAGCCGCTGATCGTGCTCGCCGCGATCGCCGGCGCCACCAAGACG ATCAAGCTCGGCACCGCGCTCACCGTGCTGCCGATGCGCGATCCGGTGTATCTCGCCAAGCAGGCGATCTCGCTCGACCA GATGTCGAACGGGCGGTTCATCATGGCGGTCGGGCTCGGCGCCTATCGGGAGGAATTTCTCGCCTGGGGCGGCTCGCGCG CCGCCAAGGCGCGGCGCGGCGACATGATGGACGAGGGGCTGCTGGCGCTCGACATGCTGTTCAACGAGCCCAGCGCCAGC CACGAAGGCGCCTACTACTCGTTCAAAGACGTCGAGATGTTTCCGAAGAGCAAGGTGCAGCCGTTCCCGCTGTATATCGG CGGGCACAATCTCGAGGCAATCGAGCGCGCCGCGCGTTACGGGCAGGGCTGGCTGCCCGGCTGGCGGCCGCTCACTGAGA TGGAGCAGCGCATCAAGGACCTCAAGGCGCGGGCCGCCGAACTCGGCCGCGACCCGGCGTCGATCGAGATCGCCCCGCAG TTTTCCTGCACCATCGCCAAGACCATGGAAGAGGCCGAGAAGCGCTACATGGAGAGCGGCCTGGTCGCGCATCGCGTATC GCTCGCCTACACCGGCCGCGACCTCAGCCACCAGGTGATCGCCAATCTGGTCGGTTCTCCCGACGTCATCCTCGAGAAGA TCGAGAAGCTGCGCGCGATCGGCATCCAGCACTGCAGCGCGCTGATGTTTCCGGCCGACACGGTCGAGGAGATGAACGAG CAGATCGAATGGTTCGGCACCGAAGTGATGGCCAAGGTGCCGGCATGA
Upstream 100 bases:
>100_bases TCGCCGAGTATCACGCCTCCGGGCTCGACGAGATCGTCATCGCCGGCGTGCGCGACGACGCGCAGATCAAAGCCATCCTA ACATCGTCATGAGGAAACGC
Downstream 100 bases:
>100_bases GCGAACCGGCGGCAGGCGCGACGGAGGAGCGGTTCGATCAGATCGATCTCGCCGCGCTCGGCCGCGCCGACCGCTACAAG ATGCTGACCGGCGCGGTGAT
Product: luciferase-like
Products: NA
Alternate protein names: Bacterial luciferase alpha chain [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKFSVCLSTGFEGVMYPIPFAGPEDFIAQAQLCERLGYDSVWGNDHITTQNYVRELFPGKPPNFYEPLIVLAAIAGATKT IKLGTALTVLPMRDPVYLAKQAISLDQMSNGRFIMAVGLGAYREEFLAWGGSRAAKARRGDMMDEGLLALDMLFNEPSAS HEGAYYSFKDVEMFPKSKVQPFPLYIGGHNLEAIERAARYGQGWLPGWRPLTEMEQRIKDLKARAAELGRDPASIEIAPQ FSCTIAKTMEEAEKRYMESGLVAHRVSLAYTGRDLSHQVIANLVGSPDVILEKIEKLRAIGIQHCSALMFPADTVEEMNE QIEWFGTEVMAKVPA
Sequences:
>Translated_335_residues MKFSVCLSTGFEGVMYPIPFAGPEDFIAQAQLCERLGYDSVWGNDHITTQNYVRELFPGKPPNFYEPLIVLAAIAGATKT IKLGTALTVLPMRDPVYLAKQAISLDQMSNGRFIMAVGLGAYREEFLAWGGSRAAKARRGDMMDEGLLALDMLFNEPSAS HEGAYYSFKDVEMFPKSKVQPFPLYIGGHNLEAIERAARYGQGWLPGWRPLTEMEQRIKDLKARAAELGRDPASIEIAPQ FSCTIAKTMEEAEKRYMESGLVAHRVSLAYTGRDLSHQVIANLVGSPDVILEKIEKLRAIGIQHCSALMFPADTVEEMNE QIEWFGTEVMAKVPA >Mature_335_residues MKFSVCLSTGFEGVMYPIPFAGPEDFIAQAQLCERLGYDSVWGNDHITTQNYVRELFPGKPPNFYEPLIVLAAIAGATKT IKLGTALTVLPMRDPVYLAKQAISLDQMSNGRFIMAVGLGAYREEFLAWGGSRAAKARRGDMMDEGLLALDMLFNEPSAS HEGAYYSFKDVEMFPKSKVQPFPLYIGGHNLEAIERAARYGQGWLPGWRPLTEMEQRIKDLKARAAELGRDPASIEIAPQ FSCTIAKTMEEAEKRYMESGLVAHRVSLAYTGRDLSHQVIANLVGSPDVILEKIEKLRAIGIQHCSALMFPADTVEEMNE QIEWFGTEVMAKVPA
Specific function: Light-emitting reaction in luminous bacteria [H]
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018235 - InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR002103 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.3 [H]
Molecular weight: Translated: 37207; Mature: 37207
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSVCLSTGFEGVMYPIPFAGPEDFIAQAQLCERLGYDSVWGNDHITTQNYVRELFPGK CCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC PPNFYEPLIVLAAIAGATKTIKLGTALTVLPMRDPVYLAKQAISLDQMSNGRFIMAVGLG CCCHHHHHHHHHHHHCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCH AYREEFLAWGGSRAAKARRGDMMDEGLLALDMLFNEPSASHEGAYYSFKDVEMFPKSKVQ HHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCCCCCC PFPLYIGGHNLEAIERAARYGQGWLPGWRPLTEMEQRIKDLKARAAELGRDPASIEIAPQ CCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCC FSCTIAKTMEEAEKRYMESGLVAHRVSLAYTGRDLSHQVIANLVGSPDVILEKIEKLRAI CHHHHHHHHHHHHHHHHHHCHHHHHHEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHH GIQHCSALMFPADTVEEMNEQIEWFGTEVMAKVPA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFSVCLSTGFEGVMYPIPFAGPEDFIAQAQLCERLGYDSVWGNDHITTQNYVRELFPGK CCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC PPNFYEPLIVLAAIAGATKTIKLGTALTVLPMRDPVYLAKQAISLDQMSNGRFIMAVGLG CCCHHHHHHHHHHHHCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCH AYREEFLAWGGSRAAKARRGDMMDEGLLALDMLFNEPSASHEGAYYSFKDVEMFPKSKVQ HHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCCCCCC PFPLYIGGHNLEAIERAARYGQGWLPGWRPLTEMEQRIKDLKARAAELGRDPASIEIAPQ CCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCC FSCTIAKTMEEAEKRYMESGLVAHRVSLAYTGRDLSHQVIANLVGSPDVILEKIEKLRAI CHHHHHHHHHHHHHHHHHHCHHHHHHEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHH GIQHCSALMFPADTVEEMNEQIEWFGTEVMAKVPA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1915359 [H]