Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is fno [H]

Identifier: 86751510

GI number: 86751510

Start: 4996713

End: 4997378

Strand: Reverse

Name: fno [H]

Synonym: RPB_4409

Alternate gene names: 86751510

Gene position: 4997378-4996713 (Counterclockwise)

Preceding gene: 86751511

Following gene: 86751509

Centisome position: 93.73

GC content: 68.02

Gene sequence:

>666_bases
ATGACTGCAACAATTCATACGATCTGTGTCGTCGGCGGCACCGGCGCCGAAGGCGGCGGACTGGCGCTGCGCTGGGCCAA
GCACGGCCACCGCGTGATCATCGCCTCGCGCGACGCCGCGAAGGCCAAGGCGGCGGCCGACGAGCTCAATGCCCGTCTCG
GCGGCGGCACAGCCGAAGGCGCCGACAGCGCCTCCGGCGTGGCGGAAGCCGACATCGTGGTGTTGACCGTGCCGTATCAG
GCGCAGATCGCGACCGTGCAGGGGCTGAAGGACGCGCTGCAGGGCAAGATCCTGATCGACGTCACCGTGCCGCTGGTGCC
GCCCAAGGTCACCCGGGTGCAGCTGCCGGAGACCGATTCCTGCGTCGTCGCGGTGCAGACGCTGCTTGGCGACGGCGTGC
GGGTGGTGTCGGCGTTCCAGAACGTCTCGGCCCACAAGCTGAAGGATCCGGACTACGCGATCGACTGCGACGTGCTGGTC
GCCGGCGACGACAAGGAGGCGCGCGCCACCGTGATGCAGCTCGCCGTCGACGCCGGCCTGCGCGGCATCGACATCGGGCC
GCTGGCCAATTCGGTGGTGTCGGAGAGCCTCACTTCGGCGCTGATCTGGATCAATAAATTCTATAAGATTCCCGACGCGG
GAGTGCGGATCACCGGCCTCCCCTGA

Upstream 100 bases:

>100_bases
GGCCTATGCCCCGGTCGCCCGCATCGGCGGCCGCAACTACGTGCGGCTCGGCGACATCGTCGAAGTATAAGCCGTCGCTG
ATAGCAGAACAGAGGATGCC

Downstream 100 bases:

>100_bases
GGAGAGTCGATTGTCGGTCCGACGTGCTTTGGAGATATTTGCCCTGGAGGGCGTGCCGCTGGTCGAGCCCGGTGACGACC
TGGCCGGTCTGATCCTGGCA

Product: NADPH-dependent F420 reductase

Products: NA

Alternate protein names: F420H2:NADP oxidoreductase [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEGADSASGVAEADIVVLTVPYQ
AQIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDSCVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLV
AGDDKEARATVMQLAVDAGLRGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP

Sequences:

>Translated_221_residues
MTATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEGADSASGVAEADIVVLTVPYQ
AQIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDSCVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLV
AGDDKEARATVMQLAVDAGLRGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP
>Mature_220_residues
TATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEGADSASGVAEADIVVLTVPYQA
QIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDSCVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLVA
GDDKEARATVMQLAVDAGLRGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP

Specific function: Catalyzes the reduction of NADP(+) with F420H(2) via hydride transfer, and the reverse reaction, i.e. the reduction of F420 with NADPH. Probably functions in the regeneration of NADPH required in biosynthetic reactions [H]

COG id: COG2085

COG function: function code R; Predicted dinucleotide-binding enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the F420-dependent NADP reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR004455
- InterPro:   IPR010185 [H]

Pfam domain/function: PF03807 F420_oxidored [H]

EC number: NA

Molecular weight: Translated: 22779; Mature: 22648

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEG
CCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
ADSASGVAEADIVVLTVPYQAQIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDS
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCC
CVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLVAGDDKEARATVMQLAVDAGL
HHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC
RGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP
CCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCC
>Mature Secondary Structure 
TATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEG
CCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
ADSASGVAEADIVVLTVPYQAQIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDS
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCC
CVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLVAGDDKEARATVMQLAVDAGL
HHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC
RGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP
CCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]