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The map label for this gene is virG [H]

Identifier: 86751487

GI number: 86751487

Start: 4969279

End: 4970004

Strand: Reverse

Name: virG [H]

Synonym: RPB_4385

Alternate gene names: 86751487

Gene position: 4970004-4969279 (Counterclockwise)

Preceding gene: 86751488

Following gene: 86751486

Centisome position: 93.22

GC content: 64.05

Gene sequence:

>726_bases
GTGAAACACATCCTTGTCGTGGACGACGACAGCAGGCTGCGAAGCATGCTGGTCGATTATCTCACGCAGCATGCCTTCCG
CGCGAGCGCCGCGAAGGACAGCCATCAGCTCGGTCAAATCCTCGCCAATGATCCCGCGGACCTCATCATCGTCGACCTCA
ATCTCGGGCGAGAAGACGGCCTCGAGATTGTCCGCTCCCATTCCACCAAGTCGGACGCGCCGATCATCATCATCAGCGGT
GATCGGCTGGACGAGGCGGACAAGGTCGTCGGCCTCGAGCTCGGCGCGTCCGACTACATCACCAAACCGTTCGGTCTGCG
GGAATTCGTCGCCCGGATACGCGCCGCGCTGCGGGTGAAGTCCCCCGCCGTCCTGCCGGATCGCAGCATCTATCGGTTCG
GCGACTGGATGCTGAACGCCAAGCGGCGCCAGCTTGCGTCGCGTGCGGCCGGAGAGGTCAAGCTGACCGCCGCCGAGTTC
AATCTGCTGATGGCCTTCCTCGGCGCGCCGAAGCAGGTGCTGTCGCGCGAGCAGTTGCTCGCTGCCAGCCGCGTTCACAA
CGAGGAGATCTTCGACAGAAGCATCGACGTGCTCATTCTGCGCCTTCGCCGCAAGCTGGAGCCCGACCCGTCGAATCCCA
AGCTGATCGTGACCGAGCGCGGCGCCGGCTATGTCCTCGACGCGGACGTGGCGGTGGAGCATCGCCCCGTCGGCAGGAAA
ATGTAA

Upstream 100 bases:

>100_bases
TCCGGCCGAATTCGTCTGTTTTCCGCAGCAACTGACCGAGAGCGAAGTTCGCATCCCATTGCGATGACGCGGGCTGCGCC
GCGCCGTCCTGGAGTCCGAC

Downstream 100 bases:

>100_bases
CGGCCGTGCAAAGCAGCAGGCCGGCCCGCCGTCCCCGATCCAGGCTGAGCGGTCTGTGCGCGGCGCTGCTGTGCTCGGTG
GTCGACTGTGCGGCGGCCGA

Product: two-component response regulator VirG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKHILVVDDDSRLRSMLVDYLTQHAFRASAAKDSHQLGQILANDPADLIIVDLNLGREDGLEIVRSHSTKSDAPIIIISG
DRLDEADKVVGLELGASDYITKPFGLREFVARIRAALRVKSPAVLPDRSIYRFGDWMLNAKRRQLASRAAGEVKLTAAEF
NLLMAFLGAPKQVLSREQLLAASRVHNEEIFDRSIDVLILRLRRKLEPDPSNPKLIVTERGAGYVLDADVAVEHRPVGRK
M

Sequences:

>Translated_241_residues
MKHILVVDDDSRLRSMLVDYLTQHAFRASAAKDSHQLGQILANDPADLIIVDLNLGREDGLEIVRSHSTKSDAPIIIISG
DRLDEADKVVGLELGASDYITKPFGLREFVARIRAALRVKSPAVLPDRSIYRFGDWMLNAKRRQLASRAAGEVKLTAAEF
NLLMAFLGAPKQVLSREQLLAASRVHNEEIFDRSIDVLILRLRRKLEPDPSNPKLIVTERGAGYVLDADVAVEHRPVGRK
M
>Mature_241_residues
MKHILVVDDDSRLRSMLVDYLTQHAFRASAAKDSHQLGQILANDPADLIIVDLNLGREDGLEIVRSHSTKSDAPIIIISG
DRLDEADKVVGLELGASDYITKPFGLREFVARIRAALRVKSPAVLPDRSIYRFGDWMLNAKRRQLASRAAGEVKLTAAEF
NLLMAFLGAPKQVLSREQLLAASRVHNEEIFDRSIDVLILRLRRKLEPDPSNPKLIVTERGAGYVLDADVAVEHRPVGRK
M

Specific function: VirG is required for the positive regulation of at least two vir loci encoded by the Ti plasmid of A.tumefaciens [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=40.6926406926407, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787229, Length=238, Percent_Identity=40.3361344537815, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=33.0472103004292, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=35.7142857142857, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=36.7256637168142, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=35.4978354978355, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1786784, Length=229, Percent_Identity=34.9344978165939, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI2367329, Length=238, Percent_Identity=35.2941176470588, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=32.4444444444444, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=28.6919831223629, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=30.6666666666667, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=31.390134529148, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=30.1801801801802, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1790552, Length=238, Percent_Identity=31.9327731092437, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003174
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26863; Mature: 26863

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHILVVDDDSRLRSMLVDYLTQHAFRASAAKDSHQLGQILANDPADLIIVDLNLGREDG
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCHHH
LEIVRSHSTKSDAPIIIISGDRLDEADKVVGLELGASDYITKPFGLREFVARIRAALRVK
HHHHHHCCCCCCCCEEEEECCCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
SPAVLPDRSIYRFGDWMLNAKRRQLASRAAGEVKLTAAEFNLLMAFLGAPKQVLSREQLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHH
AASRVHNEEIFDRSIDVLILRLRRKLEPDPSNPKLIVTERGAGYVLDADVAVEHRPVGRK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCEECCCCCCCC
M
C
>Mature Secondary Structure
MKHILVVDDDSRLRSMLVDYLTQHAFRASAAKDSHQLGQILANDPADLIIVDLNLGREDG
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCHHH
LEIVRSHSTKSDAPIIIISGDRLDEADKVVGLELGASDYITKPFGLREFVARIRAALRVK
HHHHHHCCCCCCCCEEEEECCCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
SPAVLPDRSIYRFGDWMLNAKRRQLASRAAGEVKLTAAEFNLLMAFLGAPKQVLSREQLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHH
AASRVHNEEIFDRSIDVLILRLRRKLEPDPSNPKLIVTERGAGYVLDADVAVEHRPVGRK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCEECCCCCCCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027669 [H]