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The map label for this gene is virA [H]

Identifier: 86751485

GI number: 86751485

Start: 4965769

End: 4968285

Strand: Reverse

Name: virA [H]

Synonym: RPB_4383

Alternate gene names: 86751485

Gene position: 4968285-4965769 (Counterclockwise)

Preceding gene: 86751486

Following gene: 86751484

Centisome position: 93.18

GC content: 65.59

Gene sequence:

>2517_bases
GTGTTCCGTGAGCACTGGCGGATCGGTCTGCTGGCGCTCTTCGCTGCGGTGTTCGGAACCGTCGCCCTCGGTCTCGTGCC
ATCGCGCGATCGCCACGACGGCATCCTCGCGACTTTGCGCATGATCGAGTTGCAGAACGCATCCTTGCAGCGCGACGTTC
TGCAGGCGCGCGCCGGGCTGCTCAAGAACTACGACCCGCTCGTCCGTGCGATCGCCGGGCTCAACGCGACGACGGACAAT
CTGCGGACGCTGCTGATCGCCAGTCGACGCGACGGGATCGCCGGACTGGACGGCGAGCTGGATGCGATTTCCGGTTCGAT
CGCTCGCGACGAGAGTCTCGTCGATCGGTTCAAGACCAGCAATTCGCTTCTGCAGAATTCCATCGAGATCTTCAATCAGC
TTCTCGGCCAGCGCTATCGGGACCCGTATTTCGAGGGGCAAACGCCGAGCGAACAGGCCGGACAGCTCGGCAATCTGATG
ATGCGGTTCGCGTCCAACCCCTCGGCCGACCTCGAACTGCAGATCAGGGCGGAGCTGGAAGGCCTGAAAGGTCGCGCGGA
CAGCCGGCCGGGCTATCTGCGAGGGCTGACATCCCACGCGGTGATGATCCTGAGAACGCTGCCTCTGGTGGATCAAACGA
CCCTCGCGCTTCAGGGAGCCGAAACGCTGAACGCGGCGGACGGTCTCCGCAAGCGCTACCTCGACGTCTACGAGGCGATG
ACCGAACGATCGACGCGGCACCGTGTGATCCTCGGTGCCGTCTCGCTCGCGATGTTCGGCTTCGTCGCCATGCTGGTTCA
GCGGCTTCGCGAGAGCCGCCGGATGGCGGCGTATCAGAGCCGGTTCGAAGCCGCGCTCGACAAGGTCCGGCGGCTGTTCG
ATGACGACTCCACGACGCTCGAAGCCGCCGTCGAAGCCGCCTTGGACATCTTTGCGAAGTCGTTCGGCGGAACGACGGGG
CGCTTCACGATTTTCGATCCGCGGACCGGCGAGATCCTGCACGATGTCGGACTAACGGGTTGCGAGGTGTGGGAACATGC
CGTTGGACGAGCCGGGGAGCGGATGAAGGTGCAGGCCTCCGCGGCCAATCGGGCCGCCTCGGCGCAGAGCCGCGATATCG
TGACGGTGCGGCGGGGAAACGCGATCGATGCGTCGGGAATGTTTCAACTGCAGCCCGGCAGCACGGCCTTGCTGCAGTTG
AACGTCGGCGAGCCGTCCCTGAGGGACGACACCGGTTTGCCGAGGCTGCTCCAGCAGGCCGCGGAGTGTCTCGTCGACTG
CGTCAGGCTGGTGCAGGATCGCGAGGAAAAGGAGGCGCTCCACGCGCGACTGGAGCATTCGCAGCGGCTCGAGGCCGTCG
GCACGCTCGCAGGCGGGATTGCGCACGAATTCAACAACATCCTGCTGGCGATGATGGGCTACAGCGAGATGGCGCTGGAT
GCGAGCGCGGACGGATCCGCCGCGGCGCGCTATATTCAGGAGACCATCGACAGCGGCCATCGGGCCAAGCTGGTGATCGA
TCAGGTTCTGGCGTTCAGTCGAAAGGGCGCGCGGATCAGCAGGCCCTTCGACATCTGCGAAGCCGTGCGCGACGTGCTGC
CGCTGCTGACGGTGTCGATTCCCGAGCACGTCGCGCTGGATGTCGATCTGCCTCGCCGTCGTGTGACGGTCACGGGCAAT
CCGATCGAGGTTCAGCAGATCGTCATGAACATCTGCCGGAACGCAGCCCAGGCTTGCCGCGATGCGGCGGTCGTCACCAT
CACCCTGTCGGCCGTCGAACTGCGGACCGTGACCCGACTGTCGCACGGCAACGCGCCGCCGGGCGGCTATGCGGTTCTCC
GCGTCGCCGATACGGGCGACGGAATCGAGCCAGGCGTTTTGCCGCATATTTTCGAGCCGTTCTTCACGACGCGATCCGAG
GCGGGAGGCACCGGGCTGGGGCTGGCCGCGGTGCACGGCGCGATCGTCGGCATGGGAGGCTGTGTCGACGTGCAAAGCCG
CGTCAGCGCCGGCACGCGGTTCGATCTGTACTTCCCCATCACCCATCGACCGTCCGTCGCGCTGCGCGACTTCACCGCCG
ATCAGTCCGTCCCGATGGGGGCCGGGCAGACGATCGTCATCGCGCAGGCGGATGATGCGGCGAGGATGATGTACGAAGAA
AAGGCGGCGGCCCTGGGCTATGAGCCGATCGGCTTTTCAAGACTGAGCGACCTCGACGGCTGGATCGCGAAACGCGGACA
CGTCGCCGATCTGGTGATCCTCGACGCCGGCCTTTGCTCCGACCAGCTCGATGCGTTGACTGTCGAGCGGCATTTCAGAC
CGATCCCGGTGCTGCTGATCGGAGAATCCAAGACCTTCGCAGCCGCTGAGAGAGCGGCTGTCGACCGGCCGCACGTCTTG
AAGGGTCCGGTGACGACGACCCGCCTTGCATGGGCGATCGCGACGGCGCTGGCCGAGGCCGGGGTAGAGGCAGAGGCGAT
CGGGCCCACGCGCGCGCTCTCGCCGGAATTGGACTAG

Upstream 100 bases:

>100_bases
CAGACCCTCTCCGCCTCGGACACGGACGCCATTGTGTCCTTCCTGAAAACGCTCACCGGCGAATACGATGGTCGCGAACT
CGAAAATCCGGCGCCGGCAC

Downstream 100 bases:

>100_bases
CGGACAGCCGCTCCGCCCACGACCAGGACGATCACCACCTCGCGCGTCGGCTCTCCTCTTTCATTTGTAACGCTCGGCGC
CGCCGCAGCAACATCCCTGA

Product: two-component VirA-like sensor kinase

Products: NA

Alternate protein names: WHR virA [H]

Number of amino acids: Translated: 838; Mature: 838

Protein sequence:

>838_residues
MFREHWRIGLLALFAAVFGTVALGLVPSRDRHDGILATLRMIELQNASLQRDVLQARAGLLKNYDPLVRAIAGLNATTDN
LRTLLIASRRDGIAGLDGELDAISGSIARDESLVDRFKTSNSLLQNSIEIFNQLLGQRYRDPYFEGQTPSEQAGQLGNLM
MRFASNPSADLELQIRAELEGLKGRADSRPGYLRGLTSHAVMILRTLPLVDQTTLALQGAETLNAADGLRKRYLDVYEAM
TERSTRHRVILGAVSLAMFGFVAMLVQRLRESRRMAAYQSRFEAALDKVRRLFDDDSTTLEAAVEAALDIFAKSFGGTTG
RFTIFDPRTGEILHDVGLTGCEVWEHAVGRAGERMKVQASAANRAASAQSRDIVTVRRGNAIDASGMFQLQPGSTALLQL
NVGEPSLRDDTGLPRLLQQAAECLVDCVRLVQDREEKEALHARLEHSQRLEAVGTLAGGIAHEFNNILLAMMGYSEMALD
ASADGSAAARYIQETIDSGHRAKLVIDQVLAFSRKGARISRPFDICEAVRDVLPLLTVSIPEHVALDVDLPRRRVTVTGN
PIEVQQIVMNICRNAAQACRDAAVVTITLSAVELRTVTRLSHGNAPPGGYAVLRVADTGDGIEPGVLPHIFEPFFTTRSE
AGGTGLGLAAVHGAIVGMGGCVDVQSRVSAGTRFDLYFPITHRPSVALRDFTADQSVPMGAGQTIVIAQADDAARMMYEE
KAAALGYEPIGFSRLSDLDGWIAKRGHVADLVILDAGLCSDQLDALTVERHFRPIPVLLIGESKTFAAAERAAVDRPHVL
KGPVTTTRLAWAIATALAEAGVEAEAIGPTRALSPELD

Sequences:

>Translated_838_residues
MFREHWRIGLLALFAAVFGTVALGLVPSRDRHDGILATLRMIELQNASLQRDVLQARAGLLKNYDPLVRAIAGLNATTDN
LRTLLIASRRDGIAGLDGELDAISGSIARDESLVDRFKTSNSLLQNSIEIFNQLLGQRYRDPYFEGQTPSEQAGQLGNLM
MRFASNPSADLELQIRAELEGLKGRADSRPGYLRGLTSHAVMILRTLPLVDQTTLALQGAETLNAADGLRKRYLDVYEAM
TERSTRHRVILGAVSLAMFGFVAMLVQRLRESRRMAAYQSRFEAALDKVRRLFDDDSTTLEAAVEAALDIFAKSFGGTTG
RFTIFDPRTGEILHDVGLTGCEVWEHAVGRAGERMKVQASAANRAASAQSRDIVTVRRGNAIDASGMFQLQPGSTALLQL
NVGEPSLRDDTGLPRLLQQAAECLVDCVRLVQDREEKEALHARLEHSQRLEAVGTLAGGIAHEFNNILLAMMGYSEMALD
ASADGSAAARYIQETIDSGHRAKLVIDQVLAFSRKGARISRPFDICEAVRDVLPLLTVSIPEHVALDVDLPRRRVTVTGN
PIEVQQIVMNICRNAAQACRDAAVVTITLSAVELRTVTRLSHGNAPPGGYAVLRVADTGDGIEPGVLPHIFEPFFTTRSE
AGGTGLGLAAVHGAIVGMGGCVDVQSRVSAGTRFDLYFPITHRPSVALRDFTADQSVPMGAGQTIVIAQADDAARMMYEE
KAAALGYEPIGFSRLSDLDGWIAKRGHVADLVILDAGLCSDQLDALTVERHFRPIPVLLIGESKTFAAAERAAVDRPHVL
KGPVTTTRLAWAIATALAEAGVEAEAIGPTRALSPELD
>Mature_838_residues
MFREHWRIGLLALFAAVFGTVALGLVPSRDRHDGILATLRMIELQNASLQRDVLQARAGLLKNYDPLVRAIAGLNATTDN
LRTLLIASRRDGIAGLDGELDAISGSIARDESLVDRFKTSNSLLQNSIEIFNQLLGQRYRDPYFEGQTPSEQAGQLGNLM
MRFASNPSADLELQIRAELEGLKGRADSRPGYLRGLTSHAVMILRTLPLVDQTTLALQGAETLNAADGLRKRYLDVYEAM
TERSTRHRVILGAVSLAMFGFVAMLVQRLRESRRMAAYQSRFEAALDKVRRLFDDDSTTLEAAVEAALDIFAKSFGGTTG
RFTIFDPRTGEILHDVGLTGCEVWEHAVGRAGERMKVQASAANRAASAQSRDIVTVRRGNAIDASGMFQLQPGSTALLQL
NVGEPSLRDDTGLPRLLQQAAECLVDCVRLVQDREEKEALHARLEHSQRLEAVGTLAGGIAHEFNNILLAMMGYSEMALD
ASADGSAAARYIQETIDSGHRAKLVIDQVLAFSRKGARISRPFDICEAVRDVLPLLTVSIPEHVALDVDLPRRRVTVTGN
PIEVQQIVMNICRNAAQACRDAAVVTITLSAVELRTVTRLSHGNAPPGGYAVLRVADTGDGIEPGVLPHIFEPFFTTRSE
AGGTGLGLAAVHGAIVGMGGCVDVQSRVSAGTRFDLYFPITHRPSVALRDFTADQSVPMGAGQTIVIAQADDAARMMYEE
KAAALGYEPIGFSRLSDLDGWIAKRGHVADLVILDAGLCSDQLDALTVERHFRPIPVLLIGESKTFAAAERAAVDRPHVL
KGPVTTTRLAWAIATALAEAGVEAEAIGPTRALSPELD

Specific function: Activates virG, by phosphorylating it, in the presence of acetosyringone or hydroxysyringone [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=250, Percent_Identity=26.4, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1790300, Length=247, Percent_Identity=27.1255060728745, Blast_Score=80, Evalue=7e-16,
Organism=Escherichia coli, GI1788549, Length=259, Percent_Identity=26.2548262548263, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787894, Length=238, Percent_Identity=28.1512605042017, Blast_Score=70, Evalue=8e-13,
Organism=Escherichia coli, GI87081816, Length=281, Percent_Identity=24.5551601423488, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786600, Length=233, Percent_Identity=25.3218884120172, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 90638; Mature: 90638

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFREHWRIGLLALFAAVFGTVALGLVPSRDRHDGILATLRMIELQNASLQRDVLQARAGL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
LKNYDPLVRAIAGLNATTDNLRTLLIASRRDGIAGLDGELDAISGSIARDESLVDRFKTS
HCCHHHHHHHHHCCCCCHHHHHEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH
NSLLQNSIEIFNQLLGQRYRDPYFEGQTPSEQAGQLGNLMMRFASNPSADLELQIRAELE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
GLKGRADSRPGYLRGLTSHAVMILRTLPLVDQTTLALQGAETLNAADGLRKRYLDVYEAM
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHH
TERSTRHRVILGAVSLAMFGFVAMLVQRLRESRRMAAYQSRFEAALDKVRRLFDDDSTTL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EAAVEAALDIFAKSFGGTTGRFTIFDPRTGEILHDVGLTGCEVWEHAVGRAGERMKVQAS
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHCCCCCCEEEEEH
AANRAASAQSRDIVTVRRGNAIDASGMFQLQPGSTALLQLNVGEPSLRDDTGLPRLLQQA
HHHHHHCCCCCCEEEEECCCEECCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHH
AECLVDCVRLVQDREEKEALHARLEHSQRLEAVGTLAGGIAHEFNNILLAMMGYSEMALD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEC
ASADGSAAARYIQETIDSGHRAKLVIDQVLAFSRKGARISRPFDICEAVRDVLPLLTVSI
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
PEHVALDVDLPRRRVTVTGNPIEVQQIVMNICRNAAQACRDAAVVTITLSAVELRTVTRL
CCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHH
SHGNAPPGGYAVLRVADTGDGIEPGVLPHIFEPFFTTRSEAGGTGLGLAAVHGAIVGMGG
HCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
CVDVQSRVSAGTRFDLYFPITHRPSVALRDFTADQSVPMGAGQTIVIAQADDAARMMYEE
CCCHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHH
KAAALGYEPIGFSRLSDLDGWIAKRGHVADLVILDAGLCSDQLDALTVERHFRPIPVLLI
HHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEE
GESKTFAAAERAAVDRPHVLKGPVTTTRLAWAIATALAEAGVEAEAIGPTRALSPELD
CCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFREHWRIGLLALFAAVFGTVALGLVPSRDRHDGILATLRMIELQNASLQRDVLQARAGL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
LKNYDPLVRAIAGLNATTDNLRTLLIASRRDGIAGLDGELDAISGSIARDESLVDRFKTS
HCCHHHHHHHHHCCCCCHHHHHEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH
NSLLQNSIEIFNQLLGQRYRDPYFEGQTPSEQAGQLGNLMMRFASNPSADLELQIRAELE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
GLKGRADSRPGYLRGLTSHAVMILRTLPLVDQTTLALQGAETLNAADGLRKRYLDVYEAM
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHH
TERSTRHRVILGAVSLAMFGFVAMLVQRLRESRRMAAYQSRFEAALDKVRRLFDDDSTTL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EAAVEAALDIFAKSFGGTTGRFTIFDPRTGEILHDVGLTGCEVWEHAVGRAGERMKVQAS
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHCCCCCCEEEEEH
AANRAASAQSRDIVTVRRGNAIDASGMFQLQPGSTALLQLNVGEPSLRDDTGLPRLLQQA
HHHHHHCCCCCCEEEEECCCEECCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHH
AECLVDCVRLVQDREEKEALHARLEHSQRLEAVGTLAGGIAHEFNNILLAMMGYSEMALD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEC
ASADGSAAARYIQETIDSGHRAKLVIDQVLAFSRKGARISRPFDICEAVRDVLPLLTVSI
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
PEHVALDVDLPRRRVTVTGNPIEVQQIVMNICRNAAQACRDAAVVTITLSAVELRTVTRL
CCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHH
SHGNAPPGGYAVLRVADTGDGIEPGVLPHIFEPFFTTRSEAGGTGLGLAAVHGAIVGMGG
HCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
CVDVQSRVSAGTRFDLYFPITHRPSVALRDFTADQSVPMGAGQTIVIAQADDAARMMYEE
CCCHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHH
KAAALGYEPIGFSRLSDLDGWIAKRGHVADLVILDAGLCSDQLDALTVERHFRPIPVLLI
HHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEE
GESKTFAAAERAAVDRPHVLKGPVTTTRLAWAIATALAEAGVEAEAIGPTRALSPELD
CCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2796735; 2194232; 11743193; 11743194 [H]