| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751353
Identifier: 86751353
GI number: 86751353
Start: 4836003
End: 4836875
Strand: Reverse
Name: 86751353
Synonym: RPB_4250
Alternate gene names: NA
Gene position: 4836875-4836003 (Counterclockwise)
Preceding gene: 86751354
Following gene: 86751350
Centisome position: 90.72
GC content: 68.73
Gene sequence:
>873_bases ATGGTCGAGTTTACTGCGTTCGCGTTCGGTCGCGTAGTTGTGTTGGGTCTGGGTATCGCGGCGATCGCCGCATTGGCGTC CCCCGCATCGGCCCGGCCGTTGCATCGTCATCATGGTCACACCGTTTCTCACTACGGCGATCACAGCGCGTCGGTTCGCG GCGCTCATCGCGCGTCCCGCAGCGCGTATCGCCACCAGCGCGCCGCCAAGCGCCATCGCGCCGTGCGCCGCGCGCCGCAG GCGGCGACCGGCGGCTTTGCTCAGCCGCAGCAGTTCGGCTTCGATCAGGGGCGTCATGATCAGGGGCAGAACTATTCGCT CAGCTACGCGCAGAACCAGGCGCAGAATTTCACGCCCGGCGGCGCTTCCACGTTTTCGTCCAACTACTCCGACGGCATCC ATGCGCCGCGCGTGACCAAGCAGCGCGTCTCGCGGCGCGCCGTGCGGGCTCGGGCGATGGCGCAACAGACGGAGCCGCAG CAGATGCAGACGCAGAGCTGGGCCGGTAGCGGCGGTGGCGGCAATTCGAGCCTGGTCGCCGAGGCGCGCCGCTACATCGG CGGCAACCCGACCGGCCGCAGCCGGCTGTGGTGCGCGCGGTTCATGAACATGGTGCTGGAGCGCGCGGGCCATCGCGGCA CCGGCTCCGACATGGCGAGTTCGTTCGCCCGTTACGGCCAGCGCATCTCCGGCCCGCAGGTCGGCGCCATCGCGGTGATG TCGCGCGGCAAGCGCGGCGGCCATGTCGGCATCGTCAGCGGCATCGATTCCAGCGGCAATCCGATCGTCGTCTCCGGCAA TCACGGCCGCCGCGTCGCCGAGTCGGTGTACTCCAAGAGCCGCATCTACGCCTATGTGATGCCGTCGAGCTGA
Upstream 100 bases:
>100_bases TGACGACTTCGTCGCCGCACGAGTCATTCTCTCGCCATCCCCGCTCTGTTTACGCACCGGGCCGGTCGTACTTGCCGGGT ATCGATGGAGAGAGTTCTGC
Downstream 100 bases:
>100_bases GGCCCGCTCTTACCCTCTCCCCTTGTGGGAGAGGGTAAGAGCGTGCTCACGCTGAACATGCCGACAGCCGCCGTGCAGTT AATGTATTAGGAAGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MVEFTAFAFGRVVVLGLGIAAIAALASPASARPLHRHHGHTVSHYGDHSASVRGAHRASRSAYRHQRAAKRHRAVRRAPQ AATGGFAQPQQFGFDQGRHDQGQNYSLSYAQNQAQNFTPGGASTFSSNYSDGIHAPRVTKQRVSRRAVRARAMAQQTEPQ QMQTQSWAGSGGGGNSSLVAEARRYIGGNPTGRSRLWCARFMNMVLERAGHRGTGSDMASSFARYGQRISGPQVGAIAVM SRGKRGGHVGIVSGIDSSGNPIVVSGNHGRRVAESVYSKSRIYAYVMPSS
Sequences:
>Translated_290_residues MVEFTAFAFGRVVVLGLGIAAIAALASPASARPLHRHHGHTVSHYGDHSASVRGAHRASRSAYRHQRAAKRHRAVRRAPQ AATGGFAQPQQFGFDQGRHDQGQNYSLSYAQNQAQNFTPGGASTFSSNYSDGIHAPRVTKQRVSRRAVRARAMAQQTEPQ QMQTQSWAGSGGGGNSSLVAEARRYIGGNPTGRSRLWCARFMNMVLERAGHRGTGSDMASSFARYGQRISGPQVGAIAVM SRGKRGGHVGIVSGIDSSGNPIVVSGNHGRRVAESVYSKSRIYAYVMPSS >Mature_290_residues MVEFTAFAFGRVVVLGLGIAAIAALASPASARPLHRHHGHTVSHYGDHSASVRGAHRASRSAYRHQRAAKRHRAVRRAPQ AATGGFAQPQQFGFDQGRHDQGQNYSLSYAQNQAQNFTPGGASTFSSNYSDGIHAPRVTKQRVSRRAVRARAMAQQTEPQ QMQTQSWAGSGGGGNSSLVAEARRYIGGNPTGRSRLWCARFMNMVLERAGHRGTGSDMASSFARYGQRISGPQVGAIAVM SRGKRGGHVGIVSGIDSSGNPIVVSGNHGRRVAESVYSKSRIYAYVMPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31057; Mature: 31057
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEFTAFAFGRVVVLGLGIAAIAALASPASARPLHRHHGHTVSHYGDHSASVRGAHRASR CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHCCCCCHHHHHHHHHHH SAYRHQRAAKRHRAVRRAPQAATGGFAQPQQFGFDQGRHDQGQNYSLSYAQNQAQNFTPG HHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHCCCCCC GASTFSSNYSDGIHAPRVTKQRVSRRAVRARAMAQQTEPQQMQTQSWAGSGGGGNSSLVA CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHH EARRYIGGNPTGRSRLWCARFMNMVLERAGHRGTGSDMASSFARYGQRISGPQVGAIAVM HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH SRGKRGGHVGIVSGIDSSGNPIVVSGNHGRRVAESVYSKSRIYAYVMPSS HCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure MVEFTAFAFGRVVVLGLGIAAIAALASPASARPLHRHHGHTVSHYGDHSASVRGAHRASR CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHCCCCCHHHHHHHHHHH SAYRHQRAAKRHRAVRRAPQAATGGFAQPQQFGFDQGRHDQGQNYSLSYAQNQAQNFTPG HHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHCCCCCC GASTFSSNYSDGIHAPRVTKQRVSRRAVRARAMAQQTEPQQMQTQSWAGSGGGGNSSLVA CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHH EARRYIGGNPTGRSRLWCARFMNMVLERAGHRGTGSDMASSFARYGQRISGPQVGAIAVM HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH SRGKRGGHVGIVSGIDSSGNPIVVSGNHGRRVAESVYSKSRIYAYVMPSS HCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA