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The map label for this gene is ycgM [C]

Identifier: 86751340

GI number: 86751340

Start: 4810205

End: 4811047

Strand: Direct

Name: ycgM [C]

Synonym: RPB_4234

Alternate gene names: 86751340

Gene position: 4810205-4811047 (Clockwise)

Preceding gene: 86751339

Following gene: 86751341

Centisome position: 90.22

GC content: 65.95

Gene sequence:

>843_bases
ATGAAGCTCGTTCGATATGGTGCGATCGGCCAGGAAAAACCCGGCCTGATCGATAAATCAGGCCAGTTGCGCGATCTGTC
GGCGCAACTGCCGGACCTCGCCGGCGAAGCCTTCGCGCCGGCCAGCCTCGCCAAGCTCGCCGCGCTGGATGCCGCGAGCC
TGCCGGCCGTGGCAGGCCAGCCGCGGATCGGATCGCCGGTCGGCGGCGCGCCGAAATTCATCGCTATCGGACTGAACTAC
GCGGATCACGCCGCCGAAGCCAACATGCCGATTCCGTCCGAGCCGATCGTCTTCATGAAGGCGTCGAGCTCGCTGTGCGG
GCCGAACGACGACGTCGAGAAGCCGCGCGGATCGACCAAGCTCGACTGGGAAGTCGAACTCGCGATCGTGATCGGCAGCC
GCGCCAAATACGTCTCCGAGGCCGATGCGTTGAACTACGTCGCCGGCTACGCGGTCTGCAACGACGTTTCCGAGCGCGCC
TTCCAGATCGAGCGCATGGGGCAGTGGACCAAGGGCAAGTCGCACGACACGTTCGGGCCGCTCGGGCCGTGGCTCGTCAC
CCGGGACGAGATCGCCGACGTGCACAAACTCGGGATGTGGCTCGACGTCAACGGCACGCGCTGCCAGACCGGCTCGACCG
CGACGATGATCTTCAACGTGCCGAAAATCGTGTCCTATCTGTCCGAGCTGATGACGCTGCTGCCCGGCGACATCATCACC
ACCGGCACGCCGCCCGGCGTCGGCATGGGCAAGAAACCCCCGCAATTCCTCAGCGTCGGCGACGTCGTCACGCTCGGCAT
CGACGGCCTCGGCGAGCAGAAGCAGACCATCGTGGCGGCGTGA

Upstream 100 bases:

>100_bases
GCGCGACCGCACCGCATGGGCCGCCCGCGACTACGCCGGTTGAATTTCGCGCAGCGCTGTTCCATGAGGTGAGCAGCGAA
AATTCAGGAGGAAGCGCGGC

Downstream 100 bases:

>100_bases
GCCGCAACATCAAGGACGTCATCCCGAGGAGCGCTCCGCAGGAGCGCGTCTCGAAGGATGGTGAAGTTGATAGTATTCGC
CGCCCATCGTTCGAGACGCC

Product: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKLVRYGAIGQEKPGLIDKSGQLRDLSAQLPDLAGEAFAPASLAKLAALDAASLPAVAGQPRIGSPVGGAPKFIAIGLNY
ADHAAEANMPIPSEPIVFMKASSSLCGPNDDVEKPRGSTKLDWEVELAIVIGSRAKYVSEADALNYVAGYAVCNDVSERA
FQIERMGQWTKGKSHDTFGPLGPWLVTRDEIADVHKLGMWLDVNGTRCQTGSTATMIFNVPKIVSYLSELMTLLPGDIIT
TGTPPGVGMGKKPPQFLSVGDVVTLGIDGLGEQKQTIVAA

Sequences:

>Translated_280_residues
MKLVRYGAIGQEKPGLIDKSGQLRDLSAQLPDLAGEAFAPASLAKLAALDAASLPAVAGQPRIGSPVGGAPKFIAIGLNY
ADHAAEANMPIPSEPIVFMKASSSLCGPNDDVEKPRGSTKLDWEVELAIVIGSRAKYVSEADALNYVAGYAVCNDVSERA
FQIERMGQWTKGKSHDTFGPLGPWLVTRDEIADVHKLGMWLDVNGTRCQTGSTATMIFNVPKIVSYLSELMTLLPGDIIT
TGTPPGVGMGKKPPQFLSVGDVVTLGIDGLGEQKQTIVAA
>Mature_280_residues
MKLVRYGAIGQEKPGLIDKSGQLRDLSAQLPDLAGEAFAPASLAKLAALDAASLPAVAGQPRIGSPVGGAPKFIAIGLNY
ADHAAEANMPIPSEPIVFMKASSSLCGPNDDVEKPRGSTKLDWEVELAIVIGSRAKYVSEADALNYVAGYAVCNDVSERA
FQIERMGQWTKGKSHDTFGPLGPWLVTRDEIADVHKLGMWLDVNGTRCQTGSTATMIFNVPKIVSYLSELMTLLPGDIIT
TGTPPGVGMGKKPPQFLSVGDVVTLGIDGLGEQKQTIVAA

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=235, Percent_Identity=46.3829787234043, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI40786394, Length=235, Percent_Identity=45.531914893617, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI66348062, Length=203, Percent_Identity=39.9014778325123, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI215422413, Length=201, Percent_Identity=40.2985074626866, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=40.2985074626866, Blast_Score=145, Evalue=4e-35,
Organism=Escherichia coli, GI1787428, Length=201, Percent_Identity=33.8308457711443, Blast_Score=119, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17557057, Length=201, Percent_Identity=34.8258706467662, Blast_Score=127, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6324161, Length=218, Percent_Identity=30.7339449541284, Blast_Score=92, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28572127, Length=292, Percent_Identity=42.8082191780822, Blast_Score=207, Evalue=8e-54,
Organism=Drosophila melanogaster, GI24663695, Length=266, Percent_Identity=32.7067669172932, Blast_Score=151, Evalue=4e-37,
Organism=Drosophila melanogaster, GI28571789, Length=208, Percent_Identity=38.9423076923077, Blast_Score=140, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 29502; Mature: 29502

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVRYGAIGQEKPGLIDKSGQLRDLSAQLPDLAGEAFAPASLAKLAALDAASLPAVAGQ
CCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCHHHHHHHHHCHHCCCCCCCC
PRIGSPVGGAPKFIAIGLNYADHAAEANMPIPSEPIVFMKASSSLCGPNDDVEKPRGSTK
CCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
LDWEVELAIVIGSRAKYVSEADALNYVAGYAVCNDVSERAFQIERMGQWTKGKSHDTFGP
CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LGPWLVTRDEIADVHKLGMWLDVNGTRCQTGSTATMIFNVPKIVSYLSELMTLLPGDIIT
CCCEEEEHHHHHHHHHCCEEEECCCCEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCEEE
TGTPPGVGMGKKPPQFLSVGDVVTLGIDGLGEQKQTIVAA
CCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCEEECC
>Mature Secondary Structure
MKLVRYGAIGQEKPGLIDKSGQLRDLSAQLPDLAGEAFAPASLAKLAALDAASLPAVAGQ
CCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCHHHHHHHHHCHHCCCCCCCC
PRIGSPVGGAPKFIAIGLNYADHAAEANMPIPSEPIVFMKASSSLCGPNDDVEKPRGSTK
CCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
LDWEVELAIVIGSRAKYVSEADALNYVAGYAVCNDVSERAFQIERMGQWTKGKSHDTFGP
CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LGPWLVTRDEIADVHKLGMWLDVNGTRCQTGSTATMIFNVPKIVSYLSELMTLLPGDIIT
CCCEEEEHHHHHHHHHCCEEEECCCCEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCEEE
TGTPPGVGMGKKPPQFLSVGDVVTLGIDGLGEQKQTIVAA
CCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA