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The map label for this gene is slyX

Identifier: 86751334

GI number: 86751334

Start: 4805054

End: 4805269

Strand: Direct

Name: slyX

Synonym: RPB_4228

Alternate gene names: 86751334

Gene position: 4805054-4805269 (Clockwise)

Preceding gene: 86751331

Following gene: 86751339

Centisome position: 90.12

GC content: 66.2

Gene sequence:

>216_bases
ATGGCCGACGATCAATCCCTCAGCGCGCGCATCGAGGCGTTGGAGATGCGCCTGACCTATCAGGACGAGACCATCGAGAC
CCTGAACCAGGCCGTCACCGCGCAATGGCAGCAGATCGACGCCCTGACACGGCAGATCGCGGCGCTGTCCGATCGCCTCG
CTCAGGCCGAAACCAGCGTCGCCGCCCCCGCCAACGAACGCCCGCCGCATTACTGA

Upstream 100 bases:

>100_bases
CCGATCACGATCTGCCGATGGCGCGGGGTTTCGCGCCGCCTCGGCGGCTGATAGATCATCGCGCTCTCGCGGCGAGCCCG
CACAGCATTGGAGCGGTCCG

Downstream 100 bases:

>100_bases
GGTAGTGCGGTCGTCGCGCGCGGTCTTGCGCCAGCCCGCAATCTGATCTGTGGCGGGGCTCTCTTCACCCTCCCTGGAGG
GGGAGGGTGTTTAGTCCCTC

Product: SlyX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MADDQSLSARIEALEMRLTYQDETIETLNQAVTAQWQQIDALTRQIAALSDRLAQAETSVAAPANERPPHY

Sequences:

>Translated_71_residues
MADDQSLSARIEALEMRLTYQDETIETLNQAVTAQWQQIDALTRQIAALSDRLAQAETSVAAPANERPPHY
>Mature_70_residues
ADDQSLSARIEALEMRLTYQDETIETLNQAVTAQWQQIDALTRQIAALSDRLAQAETSVAAPANERPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SLYX_RHOP2 (Q2IS91)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_487830.1
- STRING:   Q2IS91
- GeneID:   3912036
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_4228
- eggNOG:   NOG85053
- HOGENOM:   HBG700945
- OMA:   QDETIET
- ProtClustDB:   CLSK818753
- BioCyc:   RPAL316058:RPB_4228-MONOMER
- HAMAP:   MF_00715
- InterPro:   IPR007236

Pfam domain/function: PF04102 SlyX

EC number: NA

Molecular weight: Translated: 7928; Mature: 7797

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDQSLSARIEALEMRLTYQDETIETLNQAVTAQWQQIDALTRQIAALSDRLAQAETSV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AAPANERPPHY
CCCCCCCCCCC
>Mature Secondary Structure 
ADDQSLSARIEALEMRLTYQDETIETLNQAVTAQWQQIDALTRQIAALSDRLAQAETSV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AAPANERPPHY
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA