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The map label for this gene is 86751331

Identifier: 86751331

GI number: 86751331

Start: 4801887

End: 4802102

Strand: Direct

Name: 86751331

Synonym: RPB_4225

Alternate gene names: NA

Gene position: 4801887-4802102 (Clockwise)

Preceding gene: 86751316

Following gene: 86751334

Centisome position: 90.06

GC content: 64.35

Gene sequence:

>216_bases
ATGGGTAGCACGATGGACAAGATCAAGGGCACCGCCAACGAGATGACCGGCAAGGCCAAGCAGGGAATCGGCGAGGCCAC
CGGCTCCGAGAAGCTGCAGGGCGAAGGCGCCGTGCAGGAAATCAAGGGCAAGGGCCAGAAGGCGATGGGCGACGCCAAGG
AAGCCGTCAAGGACACCACCGACAAGGTGTCCGACGCCGCGCACCGCAACCTCTGA

Upstream 100 bases:

>100_bases
GCGATCTGCGACGATAAATCCCGGAACCGGCGACCGACACTGCCGTTGTCGTTACGAAGCGCACAGTCAGTGCGGCTTGT
GAGATCAAAGGAGAATTTCG

Downstream 100 bases:

>100_bases
GCGCGACCTGATTGATCGCGTGACGTTTACCCGCCCGCGATCACAACGAAAGACCGGCCTCCGGCCGGTCTTTCTGCGTT
TGGAAGCCGGGATCAGCGCC

Product: CsbD-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MGSTMDKIKGTANEMTGKAKQGIGEATGSEKLQGEGAVQEIKGKGQKAMGDAKEAVKDTTDKVSDAAHRNL

Sequences:

>Translated_71_residues
MGSTMDKIKGTANEMTGKAKQGIGEATGSEKLQGEGAVQEIKGKGQKAMGDAKEAVKDTTDKVSDAAHRNL
>Mature_70_residues
GSTMDKIKGTANEMTGKAKQGIGEATGSEKLQGEGAVQEIKGKGQKAMGDAKEAVKDTTDKVSDAAHRNL

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 7335; Mature: 7204

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSTMDKIKGTANEMTGKAKQGIGEATGSEKLQGEGAVQEIKGKGQKAMGDAKEAVKDTT
CCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
DKVSDAAHRNL
HHHHHHHHCCC
>Mature Secondary Structure 
GSTMDKIKGTANEMTGKAKQGIGEATGSEKLQGEGAVQEIKGKGQKAMGDAKEAVKDTT
CCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
DKVSDAAHRNL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA