| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is livM [C]
Identifier: 86751314
GI number: 86751314
Start: 4780333
End: 4781400
Strand: Direct
Name: livM [C]
Synonym: RPB_4208
Alternate gene names: 86751314
Gene position: 4780333-4781400 (Clockwise)
Preceding gene: 86751313
Following gene: 86751315
Centisome position: 89.66
GC content: 66.67
Gene sequence:
>1068_bases ATGATGCTTCTCTCCGGCGATCCGCCGCGCAGCCGGGTGCTGGCGCTGATCCTGATCGCGATCATCGCGATGCTGGCGAT CACCCCGTTCGTGTTTCCCGGCGCCAAGCCGCTCAACGTCGCCGCCAAGATCTGCATCTTCGCAGCCTTGGTGGCGTCCT ATGATCTGCTGCTCGGCTATACCGGCACGGTGTCGTTCGCGCACACGATGTTCTACGGCATCGGCAGCTATGCGATGGCG ATCGCGCTGTACACGATGGGCCCGAACTGGGGGGCGGTCGCGACCGGCATCGTGATCGGCCTGCCGCTGGCGGCGCTGCT CGCGCTCGGCATCGGGCTGTTCTCGCTACGGGTCGAGGCGATCTTCTTTGCGATGATCACGCTCGCGGTCGCCTCCGCCT TTCTGGTGCTGGCCTCGCAATTGTCGTGGCTGACCGGCGGCGAGGACGGCCGCAGCTTCAGCCTGCCCGAATTGCTGCGG CCGGGCACGGTGTTCATCCAGGATCTGTTCGGCGTCCGGATCAACGGCCGGATCCTGACCTATTACATCATCCTCGTCGG CTGCGCGGCGATGATCCTGGGGCTGCTGCGGGTGGTGAATTCGCCGTTCGGCCGGGTGCTGCAGGCGGTCCGCGAGAACC GCTTCCGCGCCGAAGCGCTGGGCTATCGCACCGTCTTCCACCTCACTTACGCCAATGTGCTGGCCGCGCTCGTCGCCGCC TGCGCCGGCATCCTCAACGCGATGTGGCTGCGCTACGCCGGGCCGGACACCTCGCTCAGCTTTTCGATCATGCTCGACAT TCTGCTGATGGTGGTGATCGGCGGCATGGGCACGATCTACGGCGCCATCATCGGCGCCACGATCTTCATCCTGGCACAGA ACTATCTGCAGGCGCTGATGGGCGCCGCCTCGACCGCCGCCGCCGACGCCGGCCTGCCGCTGCTGCCGGGTCTGCTGCAC CCGGATCGCTGGCTGCTGTGGCTGGGGCTGCTGTTCGTCGCCAGTGTGTATTTCTTCCCGACCGGCGTTGTCGGCCGACT GCGCGGCGCACCGAAGCCGGCCGACTGA
Upstream 100 bases:
>100_bases CCGAAGCTGGCGCTGGTCTCCAACATCCTGCTGATGGTCGCGATCCTGATGTGGCGGCCGCGCGGGCTCTATGCGGTGAC GAGCCGATGAGGGTTAGGCG
Downstream 100 bases:
>100_bases ATTCGACGGAAGTCGGAGGCCGCCGCGCCTGCACGATGGTTTGGATGGTTCTCGACCCGCGCCGTCCAGCGCTATGCGCC TGCGCAGGGGGAAGATCACG
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: Branched-Chain Amino Acid ABC Transporter Permease Protein; ABC Transporter Permease Protein; Amino Acid/Amide ABC Transporter Membrane HAAT Family; Amino Acid Or Sugar ABC Transport System Permease Protein; ABC Transporter Permease; ABC Transporter ; ABC Transporter; ABC-Type Transporter Permease Component; ABC-Type Transport System Permease Protein; ABC TRANSPORTER Membrane Component; Amino Acid ABC Transporter Permease; ABC Transporter Membrane Spanning Protein; Permease Component Of ABC Transporter; Branched Chain Amino Acid ABC Transporter Permease
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MMLLSGDPPRSRVLALILIAIIAMLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFYGIGSYAMA IALYTMGPNWGAVATGIVIGLPLAALLALGIGLFSLRVEAIFFAMITLAVASAFLVLASQLSWLTGGEDGRSFSLPELLR PGTVFIQDLFGVRINGRILTYYIILVGCAAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAA CAGILNAMWLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASTAAADAGLPLLPGLLH PDRWLLWLGLLFVASVYFFPTGVVGRLRGAPKPAD
Sequences:
>Translated_355_residues MMLLSGDPPRSRVLALILIAIIAMLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFYGIGSYAMA IALYTMGPNWGAVATGIVIGLPLAALLALGIGLFSLRVEAIFFAMITLAVASAFLVLASQLSWLTGGEDGRSFSLPELLR PGTVFIQDLFGVRINGRILTYYIILVGCAAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAA CAGILNAMWLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASTAAADAGLPLLPGLLH PDRWLLWLGLLFVASVYFFPTGVVGRLRGAPKPAD >Mature_355_residues MMLLSGDPPRSRVLALILIAIIAMLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFYGIGSYAMA IALYTMGPNWGAVATGIVIGLPLAALLALGIGLFSLRVEAIFFAMITLAVASAFLVLASQLSWLTGGEDGRSFSLPELLR PGTVFIQDLFGVRINGRILTYYIILVGCAAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAA CAGILNAMWLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASTAAADAGLPLLPGLLH PDRWLLWLGLLFVASVYFFPTGVVGRLRGAPKPAD
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37667; Mature: 37667
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLLSGDPPRSRVLALILIAIIAMLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC TGTVSFAHTMFYGIGSYAMAIALYTMGPNWGAVATGIVIGLPLAALLALGIGLFSLRVEA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFFAMITLAVASAFLVLASQLSWLTGGEDGRSFSLPELLRPGTVFIQDLFGVRINGRILT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCCEECCHHHH YYIILVGCAAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CAGILNAMWLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALM HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GAASTAAADAGLPLLPGLLHPDRWLLWLGLLFVASVYFFPTGVVGRLRGAPKPAD CCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC >Mature Secondary Structure MMLLSGDPPRSRVLALILIAIIAMLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC TGTVSFAHTMFYGIGSYAMAIALYTMGPNWGAVATGIVIGLPLAALLALGIGLFSLRVEA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFFAMITLAVASAFLVLASQLSWLTGGEDGRSFSLPELLRPGTVFIQDLFGVRINGRILT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCCEECCHHHH YYIILVGCAAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CAGILNAMWLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALM HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GAASTAAADAGLPLLPGLLHPDRWLLWLGLLFVASVYFFPTGVVGRLRGAPKPAD CCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA