Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751304

Identifier: 86751304

GI number: 86751304

Start: 4769580

End: 4770098

Strand: Reverse

Name: 86751304

Synonym: RPB_4197

Alternate gene names: NA

Gene position: 4770098-4769580 (Counterclockwise)

Preceding gene: 86751305

Following gene: 86751302

Centisome position: 89.47

GC content: 69.36

Gene sequence:

>519_bases
ATGCGGCTGCGCGACGCTCTGCGCCAGGCGCGGATCGAGGCCGCCGATCGCACCGGCGTGGTGGTCGATCTGCGCGACGC
CGAGATCGCCCGGCTGGAAATCCTCAACGAGGCGCTCGACCCGCTGTTCGCGGAAATCCCCGACGGCGTCGATCTGTTCG
ATCGCGGCCTCAGCCAGGGCGACACGCCGCGGCTGTGGATCGACGTCGTCGCCCATGTGATGATGGGGCGTGACAAGCGG
ATCTACCGCTTCGTCCAGGACACCCGGTTCGGCCGCATCGTACTGGCGGAATCGCACGAGGCCGCGAAGATCGTCGACGC
GATCACCGACTACGTCGCTCGCCGGCTGATCGAGCGTGAACACGCGCTGACGGCCGCGACGCCGCTGCCCGCACCCCCGG
CGCCGGTATCTGTCGACAAGCCGCGCCGTAGCGGCTTCGGGATCTTCGTGCTCGGCTTCGTCGCCGGCGCGCTGGCGCTG
TTCGCGCTGGCCCTGTTCGCGGCGCTGCGGAATATGTGA

Upstream 100 bases:

>100_bases
GCTGCCGAGGGTTACTGATAGGTTAATTTCGGGCAGTTGGGCCGGATGGCAGATGGCGGACGCGCAGAACAGAAATGCCG
GGGCGGAACAGGTGCGGCCG

Downstream 100 bases:

>100_bases
AAGGCGCACCTCTAAGAATGCCAACCTCTCCCCGTCATTGCGAGGAGCGAAGCGACGAAGCAATCCAGGAGCGCTTCTCC
CGGCGCTGCTGGATTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQGDTPRLWIDVVAHVMMGRDKR
IYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIEREHALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALAL
FALALFAALRNM

Sequences:

>Translated_172_residues
MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQGDTPRLWIDVVAHVMMGRDKR
IYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIEREHALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALAL
FALALFAALRNM
>Mature_172_residues
MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQGDTPRLWIDVVAHVMMGRDKR
IYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIEREHALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALAL
FALALFAALRNM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19043; Mature: 19043

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQG
CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
DTPRLWIDVVAHVMMGRDKRIYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIERE
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
HALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALALFALALFAALRNM
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQG
CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
DTPRLWIDVVAHVMMGRDKRIYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIERE
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
HALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALALFALALFAALRNM
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA