| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751304
Identifier: 86751304
GI number: 86751304
Start: 4769580
End: 4770098
Strand: Reverse
Name: 86751304
Synonym: RPB_4197
Alternate gene names: NA
Gene position: 4770098-4769580 (Counterclockwise)
Preceding gene: 86751305
Following gene: 86751302
Centisome position: 89.47
GC content: 69.36
Gene sequence:
>519_bases ATGCGGCTGCGCGACGCTCTGCGCCAGGCGCGGATCGAGGCCGCCGATCGCACCGGCGTGGTGGTCGATCTGCGCGACGC CGAGATCGCCCGGCTGGAAATCCTCAACGAGGCGCTCGACCCGCTGTTCGCGGAAATCCCCGACGGCGTCGATCTGTTCG ATCGCGGCCTCAGCCAGGGCGACACGCCGCGGCTGTGGATCGACGTCGTCGCCCATGTGATGATGGGGCGTGACAAGCGG ATCTACCGCTTCGTCCAGGACACCCGGTTCGGCCGCATCGTACTGGCGGAATCGCACGAGGCCGCGAAGATCGTCGACGC GATCACCGACTACGTCGCTCGCCGGCTGATCGAGCGTGAACACGCGCTGACGGCCGCGACGCCGCTGCCCGCACCCCCGG CGCCGGTATCTGTCGACAAGCCGCGCCGTAGCGGCTTCGGGATCTTCGTGCTCGGCTTCGTCGCCGGCGCGCTGGCGCTG TTCGCGCTGGCCCTGTTCGCGGCGCTGCGGAATATGTGA
Upstream 100 bases:
>100_bases GCTGCCGAGGGTTACTGATAGGTTAATTTCGGGCAGTTGGGCCGGATGGCAGATGGCGGACGCGCAGAACAGAAATGCCG GGGCGGAACAGGTGCGGCCG
Downstream 100 bases:
>100_bases AAGGCGCACCTCTAAGAATGCCAACCTCTCCCCGTCATTGCGAGGAGCGAAGCGACGAAGCAATCCAGGAGCGCTTCTCC CGGCGCTGCTGGATTGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQGDTPRLWIDVVAHVMMGRDKR IYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIEREHALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALAL FALALFAALRNM
Sequences:
>Translated_172_residues MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQGDTPRLWIDVVAHVMMGRDKR IYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIEREHALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALAL FALALFAALRNM >Mature_172_residues MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQGDTPRLWIDVVAHVMMGRDKR IYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIEREHALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALAL FALALFAALRNM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19043; Mature: 19043
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQG CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC DTPRLWIDVVAHVMMGRDKRIYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIERE CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH HALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALALFALALFAALRNM HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLRDALRQARIEAADRTGVVVDLRDAEIARLEILNEALDPLFAEIPDGVDLFDRGLSQG CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC DTPRLWIDVVAHVMMGRDKRIYRFVQDTRFGRIVLAESHEAAKIVDAITDYVARRLIERE CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH HALTAATPLPAPPAPVSVDKPRRSGFGIFVLGFVAGALALFALALFAALRNM HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA