| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is prs [H]
Identifier: 86751275
GI number: 86751275
Start: 4739357
End: 4740310
Strand: Direct
Name: prs [H]
Synonym: RPB_4168
Alternate gene names: 86751275
Gene position: 4739357-4740310 (Clockwise)
Preceding gene: 86751274
Following gene: 86751277
Centisome position: 88.89
GC content: 64.57
Gene sequence:
>954_bases ATGTCGTGGAAAAACGGCTCCGTCAAGCTTGTCGCCGGCAATTCCAATCCCGAGCTGGCGCGCGGCATTGCCGACTGGCT GAAGATGCCGCTCACCAAAGCCAGCGTCCGCCGCTTCGCCGACAACGAGGTGTTCGTCGAGATCCAGGAGAACGTCCGCG GCTCGGATGTCTACATCATCCAGTCGACGTCGTTTCCGACCAACGACCATCTGATGGAACTCTTGATCATCACCGACGCG CTGCGCCGCGCCTCGGCGCGCCGGATCACCGCGGTGATCCCGTATTTCGGCTACGCCCGCCAGGACCGCAAGGCCGGTGG ACGAACGCCGATCTCGGCCAAGCTGGTCGCCAATCTGATCACCCATGCGGGGACGGATCGGGTGATGACGCTCGATCTGC ACGCCGGCCAGATCCAGGGCTTCTTCGATATCCCGACCGATAACCTGTTCGCCTCGCCGGTGATGGTGCGCGACATCAAG GAGCGCTTCGACCTGTCGAAAGTCGCAGTGGTGTCGCCCGACGTCGGCGGCGTGGTCCGCGCCCGCGGTCTCGCCAAGCG CATCAACGCGCCGCTGGCGATCATCGACAAGCGCCGCGAGCGCGCCGGCGAATCCGAAGTGATGAACGTGATCGGCGAAG TCGAGGGCTATACCTGCATCCTGATCGACGACATCGTCGATTCCGGCGGCACGCTGGTGAACGCCGCCGACGCGCTGCTC GCCAACGGCGCCAAGGACGTCTACGCCTACATCACCCACGGCGTGCTGTCCGGCGGCGCCTGCGCCCGCATCAATTCCTC GAAGCTGAAAGAGCTGGTGATCACCGACTCGATCCAGCCGACCAACGCGGTGTGCAACAGCGCCAACATCCGCACCCTGT CGATCGCCTCGCTGATCGCCGAAGCGATCGGCCGCACCGCCTCCGAAGAGTCGGTGTCGAGCCTGTTCGACTGA
Upstream 100 bases:
>100_bases CGCCACCGGCTGATATCACCTCGCTCGCAAAAGCGCCCGTTTTCGTGAGTCAACCGATATGCTGAACGTTGTGTCCACCG CGGCGAGGGGAAACGCGTCG
Downstream 100 bases:
>100_bases TAACTCACCCCCACACCGTCATTCCGGGGCACGCGCGCAGCGCGTGAACCCGGAATCCAGACGTTCAGGGCACCTCTGGA TTCCGGGTTCGCGAGCTGCG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSWKNGSVKLVAGNSNPELARGIADWLKMPLTKASVRRFADNEVFVEIQENVRGSDVYIIQSTSFPTNDHLMELLIITDA LRRASARRITAVIPYFGYARQDRKAGGRTPISAKLVANLITHAGTDRVMTLDLHAGQIQGFFDIPTDNLFASPVMVRDIK ERFDLSKVAVVSPDVGGVVRARGLAKRINAPLAIIDKRRERAGESEVMNVIGEVEGYTCILIDDIVDSGGTLVNAADALL ANGAKDVYAYITHGVLSGGACARINSSKLKELVITDSIQPTNAVCNSANIRTLSIASLIAEAIGRTASEESVSSLFD
Sequences:
>Translated_317_residues MSWKNGSVKLVAGNSNPELARGIADWLKMPLTKASVRRFADNEVFVEIQENVRGSDVYIIQSTSFPTNDHLMELLIITDA LRRASARRITAVIPYFGYARQDRKAGGRTPISAKLVANLITHAGTDRVMTLDLHAGQIQGFFDIPTDNLFASPVMVRDIK ERFDLSKVAVVSPDVGGVVRARGLAKRINAPLAIIDKRRERAGESEVMNVIGEVEGYTCILIDDIVDSGGTLVNAADALL ANGAKDVYAYITHGVLSGGACARINSSKLKELVITDSIQPTNAVCNSANIRTLSIASLIAEAIGRTASEESVSSLFD >Mature_316_residues SWKNGSVKLVAGNSNPELARGIADWLKMPLTKASVRRFADNEVFVEIQENVRGSDVYIIQSTSFPTNDHLMELLIITDAL RRASARRITAVIPYFGYARQDRKAGGRTPISAKLVANLITHAGTDRVMTLDLHAGQIQGFFDIPTDNLFASPVMVRDIKE RFDLSKVAVVSPDVGGVVRARGLAKRINAPLAIIDKRRERAGESEVMNVIGEVEGYTCILIDDIVDSGGTLVNAADALLA NGAKDVYAYITHGVLSGGACARINSSKLKELVITDSIQPTNAVCNSANIRTLSIASLIAEAIGRTASEESVSSLFD
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=311, Percent_Identity=46.9453376205788, Blast_Score=291, Evalue=4e-79, Organism=Homo sapiens, GI4506129, Length=311, Percent_Identity=46.6237942122186, Blast_Score=288, Evalue=5e-78, Organism=Homo sapiens, GI28557709, Length=311, Percent_Identity=46.3022508038585, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI84875539, Length=314, Percent_Identity=46.1783439490446, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI4506133, Length=351, Percent_Identity=33.9031339031339, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI194018537, Length=332, Percent_Identity=35.8433734939759, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI310128524, Length=144, Percent_Identity=32.6388888888889, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI310115209, Length=144, Percent_Identity=32.6388888888889, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI310118259, Length=144, Percent_Identity=32.6388888888889, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI310119946, Length=144, Percent_Identity=32.6388888888889, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1787458, Length=312, Percent_Identity=54.4871794871795, Blast_Score=345, Evalue=3e-96, Organism=Caenorhabditis elegans, GI25149168, Length=311, Percent_Identity=47.588424437299, Blast_Score=298, Evalue=3e-81, Organism=Caenorhabditis elegans, GI17554702, Length=311, Percent_Identity=47.588424437299, Blast_Score=298, Evalue=3e-81, Organism=Caenorhabditis elegans, GI71989924, Length=311, Percent_Identity=47.588424437299, Blast_Score=296, Evalue=7e-81, Organism=Caenorhabditis elegans, GI17554704, Length=311, Percent_Identity=47.588424437299, Blast_Score=295, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17570245, Length=335, Percent_Identity=34.0298507462687, Blast_Score=188, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320946, Length=312, Percent_Identity=46.7948717948718, Blast_Score=276, Evalue=4e-75, Organism=Saccharomyces cerevisiae, GI6319403, Length=314, Percent_Identity=46.4968152866242, Blast_Score=271, Evalue=8e-74, Organism=Saccharomyces cerevisiae, GI6321776, Length=312, Percent_Identity=46.474358974359, Blast_Score=267, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=41.8367346938776, Blast_Score=155, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6324511, Length=101, Percent_Identity=41.5841584158416, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355239, Length=311, Percent_Identity=47.2668810289389, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI45551540, Length=334, Percent_Identity=44.6107784431138, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI24651458, Length=351, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24651456, Length=351, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI281362873, Length=351, Percent_Identity=33.3333333333333, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24651454, Length=351, Percent_Identity=33.3333333333333, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24651462, Length=199, Percent_Identity=38.1909547738693, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI24651464, Length=199, Percent_Identity=38.1909547738693, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI45552010, Length=199, Percent_Identity=38.1909547738693, Blast_Score=137, Evalue=8e-33,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34170; Mature: 34039
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKNGSVKLVAGNSNPELARGIADWLKMPLTKASVRRFADNEVFVEIQENVRGSDVYII CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEE QSTSFPTNDHLMELLIITDALRRASARRITAVIPYFGYARQDRKAGGRTPISAKLVANLI ECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHH THAGTDRVMTLDLHAGQIQGFFDIPTDNLFASPVMVRDIKERFDLSKVAVVSPDVGGVVR HHCCCCEEEEEEECCCCCCEEEECCCCCHHCCHHHHHHHHHHCCCCEEEEECCCCCCHHH ARGLAKRINAPLAIIDKRRERAGESEVMNVIGEVEGYTCILIDDIVDSGGTLVNAADALL HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEHHHCCCCCEEHHHHHHH ANGAKDVYAYITHGVLSGGACARINSSKLKELVITDSIQPTNAVCNSANIRTLSIASLIA HCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHEECCCCCHHHHHCCCCCEEHHHHHHHH EAIGRTASEESVSSLFD HHHCCCCCHHHHHHHCC >Mature Secondary Structure SWKNGSVKLVAGNSNPELARGIADWLKMPLTKASVRRFADNEVFVEIQENVRGSDVYII CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEE QSTSFPTNDHLMELLIITDALRRASARRITAVIPYFGYARQDRKAGGRTPISAKLVANLI ECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHH THAGTDRVMTLDLHAGQIQGFFDIPTDNLFASPVMVRDIKERFDLSKVAVVSPDVGGVVR HHCCCCEEEEEEECCCCCCEEEECCCCCHHCCHHHHHHHHHHCCCCEEEEECCCCCCHHH ARGLAKRINAPLAIIDKRRERAGESEVMNVIGEVEGYTCILIDDIVDSGGTLVNAADALL HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEHHHCCCCCEEHHHHHHH ANGAKDVYAYITHGVLSGGACARINSSKLKELVITDSIQPTNAVCNSANIRTLSIASLIA HCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHEECCCCCHHHHHCCCCCEEHHHHHHHH EAIGRTASEESVSSLFD HHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]