| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751260
Identifier: 86751260
GI number: 86751260
Start: 4728454
End: 4728885
Strand: Direct
Name: 86751260
Synonym: RPB_4153
Alternate gene names: NA
Gene position: 4728454-4728885 (Clockwise)
Preceding gene: 86751259
Following gene: 86751261
Centisome position: 88.69
GC content: 62.96
Gene sequence:
>432_bases ATGACAGAGCACAGCCTCTGGCGTTTCTCGCGCGCTTTGCATCGCGCGCTCAACGAGCGCCGTCTTGATGACCTGGCGAA CATCATCGACGAGGACGTCGATTGGGCGATCTATGGCCCGATCGACATGTTCCCGTTCTTCGGCGCGCGCCACGGCAAGG CCGCGGTGATCGAGGTCTGCCAGCAGATCGCCGACAACATCCGCATCCATCGCTACGATCGCGAGGCGATCATGCTCGGC GTCGACACCTCCGCGTCGATGGTCCGCTACTCGCTGACCGCGCTCGATACCAACAAGCCGATCAGCCTGCGGATGGCGCA GTTCGCGCAGTTCAGGGCCGGCAAACTGGTCAGCATGCGGATTCTGATCGACACGTTCGACCTGGTCGAACAGGCGATCG GCCATCCGATCGACCTGCCGCGGATCGCCTGA
Upstream 100 bases:
>100_bases ATTCGTTCGTATTAGCACAGCAAAGGGTGCGGCGGCACGCGATGTCGCCTGGTGCTGCTGGCTGAATGTAACTCCAGTTT CCACGAACCCGGACCGTCTC
Downstream 100 bases:
>100_bases GCCCCCTCCCCCAACGATCCGGCGTGCGACTGTTAGGACTTGGTTAGCGAATTCGTGGAAACACCGGGTGGCCGCCGCAG ATTGGCCGCGATGCGGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVCQQIADNIRIHRYDREAIMLG VDTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMRILIDTFDLVEQAIGHPIDLPRIA
Sequences:
>Translated_143_residues MTEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVCQQIADNIRIHRYDREAIMLG VDTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMRILIDTFDLVEQAIGHPIDLPRIA >Mature_142_residues TEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVCQQIADNIRIHRYDREAIMLGV DTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMRILIDTFDLVEQAIGHPIDLPRIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16368; Mature: 16237
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCCHHHHHHH QQIADNIRIHRYDREAIMLGVDTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMR HHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEHH ILIDTFDLVEQAIGHPIDLPRIA HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCCHHHHHHH QQIADNIRIHRYDREAIMLGVDTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMR HHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEHH ILIDTFDLVEQAIGHPIDLPRIA HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA