| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is arcA [C]
Identifier: 86751149
GI number: 86751149
Start: 4611840
End: 4612214
Strand: Reverse
Name: arcA [C]
Synonym: RPB_4041
Alternate gene names: 86751149
Gene position: 4612214-4611840 (Counterclockwise)
Preceding gene: 86751150
Following gene: 86751148
Centisome position: 86.51
GC content: 63.47
Gene sequence:
>375_bases ATGCACCGATCGATGAGCACCAAATTGGTCGTCCTCGTCGTCGAAGACGAAGCACTACTGCGCATGAACGCGATCGACAT GATCGAGGACGCCGGATTCGAGGTGCTCGAGGCGAGCAATGCCGACGACGCGATCGCGATTCTCGAGGGCCGCGACGACA TCCGGGTCGTGTTCACCGACATCCAGATGCCGGGTTCGATGGATGGGCTGAAGCTGGCCCGCGCGGTGCGGGGCCGCTGG CCGCCGATCAAGATCATCGCCACCTCGGGCCGGGTCAACGTGTCCAGCACCGACCTGCCGGACGGCGGACGGTTTCTGGC GAAGCCTTATACGTCGCGCGATGTGACGAACCTGCTCACGGAAATCACCGCCTGA
Upstream 100 bases:
>100_bases CCGAGGCGGTCGGAAGTACACAGGTGGATTTACCAATGTCGCCTGAAACCGGAACGATCGGGCGCTGTAACCTTTGACTG ACCTCACACGAGGTTGAAGG
Downstream 100 bases:
>100_bases GGGGAATTTCTGCCTGACGGAAGCCTGATGGGATGCCGCGGCCGGCCCGGTTTCGGGTTTTGCGCTGCAGCGAAAGTCGC GGTTTCCAAAATTTAATCTA
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver; Response Regulator; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator Protein; Periplasmic Sensor Hybrid Histidine Kinase; Two Component Response Regulator; GAF Sensor Hybrid Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Two-Component Sensor Histidine Kinase Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Chemotaxis Response Regulator; Two Component Sensor Kinase/Response Regulator Hybrid
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTDIQMPGSMDGLKLARAVRGRW PPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLTEITA
Sequences:
>Translated_124_residues MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTDIQMPGSMDGLKLARAVRGRW PPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLTEITA >Mature_124_residues MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTDIQMPGSMDGLKLARAVRGRW PPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLTEITA
Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Represses A Wide Variety Of Aerobic Enzymes Under Anaerobic Conditions. Controls The Resistance Of E.Coli To Dyes; Required For Expression Of The Alkaline Phosphatase And Sex Factor F Genes; It Als
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13558; Mature: 13558
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTD CCCCCCCEEEEEEECCCCEEEHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEEEEE IQMPGSMDGLKLARAVRGRWPPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLT CCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCHHHHHHH EITA HHCC >Mature Secondary Structure MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTD CCCCCCCEEEEEEECCCCEEEHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEEEEE IQMPGSMDGLKLARAVRGRWPPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLT CCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCHHHHHHH EITA HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA