| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751127
Identifier: 86751127
GI number: 86751127
Start: 4586924
End: 4588237
Strand: Direct
Name: 86751127
Synonym: RPB_4019
Alternate gene names: NA
Gene position: 4586924-4588237 (Clockwise)
Preceding gene: 86751123
Following gene: 86751128
Centisome position: 86.03
GC content: 67.05
Gene sequence:
>1314_bases ATGACGGCTGAAGTTCTGATCGGTGATGGCGATGGTAGACTTTCGCCGCATCCACTGCGGGCGGCCGTCTTGGGCGAGGT TCACGCGCGCCCGTTCACTGCGCTCGCAGTGCCGGCGCGGGTGCTGCATTTCGCGTTCGACACCTCGGGCGAGAAGGCCA AGGCCGATCGCATCGCGCTGACGAAATTCTGCGAATCACGCGGGCTGCAGCCGCCGCCGTCCAACGAGAAGCATCACCGC GCCTCGTTCGGCACGACCATGCTGCGCTGGGAACAGCATTCCGAATTCACCACCTACACCTGGGAATTCACCGCCGACCC GGTCGCGATGCCGTTTCATCCGGAGGCCTCGTCGCTGGCTTCGCCGATGCGGCTGGTGCCCCAGCCCGGGCCGTTGCTGG TCGCGGTCGATCTGCATGCGCTGCCGGACGATCCGCCGCGCACCGCGCCGGAGCGATTGTTCGATCGCGCCAGCCTCGCT GTCGCGGAGAATTCCGACGGCGCGGCGGTCTATGCCACCGATTTCCAGCCCGGTCCCTCGGGCTTCGTGCGGGTGCTGGT GATCGATCGCGGCATGGCGCCGGAGCGCGCCGGAGCGCTGGTGCAGCGTGTGCTCGAAATCGAGACCTATCGCACGCTGG CGCTGCTCGGCCTGCCGGAAGCGCAGCGGCTCGGTCCCTCGATCAGCAACGGCGAGCGCCGCCTCGCCGAAGTCACCGCC GAAATGCGCAAGGCGGCCGATCTCGCCATCAACAACAGACTGCTGCAGGAACTGACCGAACTCGCCGCCGAGGTCGAAGC CGGCGCCGCCGCCAGTCTGGGCCGCTTCAGCGCCAGCCGCGCCTATGAAGAGATCATGACCGGCCGGCTGGCGACGCTCG GCGAACGCAAGGTCGGCGGCCTGCCGACCTGGTCGTCGTTCCTCGCCCGCCGGATGAAGCCGGCGATGCGCACCTGCACC ACCACCGAGGCGCGACAATCCGACCTGTCGCTGAAACTCGCCCGCGCCGCCAACCTGCTGCGAACCCGCGTCGACGTCGA GCTCGAACATCAGAATCAAGAGCTGCTGAAATCGATGAACGCGCGGACGCGGCTGCAATTGCGGCTGCAGGCCACCGTCG AAGGCCTCTCCACCGCGGCGATCACCTACTACGTGGTCGGGCTGTTCGGTTATTTGGTGAAGGGTCTGCACGATTCCGGC CAGATCACGGTCGAGCCGAGCCTCGTCACCGCGGGTTTCGTGCCGATCGCCGCGTTCTCGATCTGGTGGACGGTGCGCAG CATCCGCAGGAAACACATCGCGAGCGAGGATTGA
Upstream 100 bases:
>100_bases TTGACGCTGCCTGCGCAGGTAAAACCTTTCGGCTTCTGTCCATCGCGCTGCAATGCTACTCAAGTCAACCAGCGCAATGT TGAGCAAGGTCAAACCCCCT
Downstream 100 bases:
>100_bases TGACCATCGCCGCCAGGTCGACACTCGCGCGGCTGCTCGTCGCCCTCGTCGCGGTGATCGCGATCGCCACCGCCTTGTGG CAATTGCATCGCGCCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIALTKFCESRGLQPPPSNEKHHR ASFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLASPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLA VAENSDGAAVYATDFQPGPSGFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTA EMRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGGLPTWSSFLARRMKPAMRTCT TTEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMNARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSG QITVEPSLVTAGFVPIAAFSIWWTVRSIRRKHIASED
Sequences:
>Translated_437_residues MTAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIALTKFCESRGLQPPPSNEKHHR ASFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLASPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLA VAENSDGAAVYATDFQPGPSGFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTA EMRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGGLPTWSSFLARRMKPAMRTCT TTEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMNARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSG QITVEPSLVTAGFVPIAAFSIWWTVRSIRRKHIASED >Mature_436_residues TAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIALTKFCESRGLQPPPSNEKHHRA SFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLASPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLAV AENSDGAAVYATDFQPGPSGFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTAE MRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGGLPTWSSFLARRMKPAMRTCTT TEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMNARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSGQ ITVEPSLVTAGFVPIAAFSIWWTVRSIRRKHIASED
Specific function: Unknown
COG id: COG4949
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47786; Mature: 47655
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIAL CCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH TKFCESRGLQPPPSNEKHHRASFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLA HHHHHHCCCCCCCCCCCCHHHHHCCHHEEECCCCCEEEEEEEEECCCEECCCCCCHHHHC SPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLAVAENSDGAAVYATDFQPGPS CCHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEECCCCCCC GFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTA CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCCCCCHHHHHHHHHH EMRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LPTWSSFLARRMKPAMRTCTTTEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMN CCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHCC ARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSGQITVEPSLVTAGFVPIAAFS CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCHHHHHHHH IWWTVRSIRRKHIASED HHHHHHHHHHHHCCCCC >Mature Secondary Structure TAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIAL CCEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH TKFCESRGLQPPPSNEKHHRASFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLA HHHHHHCCCCCCCCCCCCHHHHHCCHHEEECCCCCEEEEEEEEECCCEECCCCCCHHHHC SPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLAVAENSDGAAVYATDFQPGPS CCHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEECCCCCCC GFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTA CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCCCCCHHHHHHHHHH EMRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LPTWSSFLARRMKPAMRTCTTTEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMN CCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHCC ARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSGQITVEPSLVTAGFVPIAAFS CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCHHHHHHHH IWWTVRSIRRKHIASED HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA