| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is crtC [H]
Identifier: 86751114
GI number: 86751114
Start: 4573480
End: 4574433
Strand: Direct
Name: crtC [H]
Synonym: RPB_4006
Alternate gene names: 86751114
Gene position: 4573480-4574433 (Clockwise)
Preceding gene: 86751113
Following gene: 86751122
Centisome position: 85.78
GC content: 67.4
Gene sequence:
>954_bases ATGATTGCCTGGCCCAACGAGACCGACGAACGCCGCGCCGGATTCAACCTCGACGTTCCGCCCAACGGCTATGCCTGGTG GTATGTCGACGCGATCAGCGACGACGGCAGCGAAGGCCTCACCATCATCGCCTTCATCGGCAGCGTGTTCTCGCCCTACT ACAAATTCGCGCGGCGCGACGCGCCGGCCGATCCGTTGAACCATTGCGCGCTCAATGTCGCGCTGTATCACAGCGCCGGC AAGCGCTGGACCATGACCGAGCGCTCGCGCGGCCGGGTCGCGCGCAATCTGCATTCGCTGCTGATCGGGCCGAGCGACCT CGCCTGGGACCGCCGTGCGCTGACCATCAACATCAACGAAGTGCGCGCGCCGATCCCCGGCCGGATCAAGGGCCGCGTCC GCGTCATCCCGCAGTTCGTGACGAAGAACAACTTCGTGCTCAACACGGACGGCAACCACCGCTGGTGGCCGATCGCGCCG CGCTCGCGAATCGAGGTGACGCTGGAGCAGCCCAAGCTGTCGTGGCAGGGCGAGGCCTATCTCGACTGCAACGCCGGCGA TGCGCCGATCGAGACCGGCTTCACGCATTGGGAATGGGCCCGCGGCGCGCTGCGCGACAAGACCGCGATCCTGTACGAAG CCGAGCGCCGCGACGGCAGCCGGGTCGATCTGGCGATCACCTTCGACGCGCAAGGCAACATGGAGCGCTTCACCCCGCCA CCGCTGCTGCCGCTGCCGCGCTCCGGCTGGCAAGTCAGCCGCAGCGCCCGCAGCGAGACCGACGCGCGCGTGATCCGAAC GCTGGAAGACTCGCCGTTCTACGCCCGCTCGATGGTCGCCACCACGCTGCTCGGCGAACGCGTGACGCTGATGCACGAAA GCCTGTCGCTGGATCGCTTCAAGATGCCGGTGGTGCAGGCGATGCTGCCGTTCCGGATGCCGCGGCGGAAGTGA
Upstream 100 bases:
>100_bases CCTCGAGGCCGAGCTGCAGGGCTTGAAGCCGATGCTGCGGCCGGCCGCCACCTGAACCGACGCGCGACACTCACCGCGCA AGTACAAAGCACACGAATCG
Downstream 100 bases:
>100_bases GGGGCTGCGCGTTCTCGTGGATGGCCGGGACGGAGCCCGGCCATGACGGATTCAGTGCCCCTCGGGAAATTTCGTGAGCT TCGCCTTCTCCTCTTCCCGC
Product: hydroxyneurosporene synthase
Products: NA
Alternate protein names: Hydroxyneurosporene synthase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MIAWPNETDERRAGFNLDVPPNGYAWWYVDAISDDGSEGLTIIAFIGSVFSPYYKFARRDAPADPLNHCALNVALYHSAG KRWTMTERSRGRVARNLHSLLIGPSDLAWDRRALTININEVRAPIPGRIKGRVRVIPQFVTKNNFVLNTDGNHRWWPIAP RSRIEVTLEQPKLSWQGEAYLDCNAGDAPIETGFTHWEWARGALRDKTAILYEAERRDGSRVDLAITFDAQGNMERFTPP PLLPLPRSGWQVSRSARSETDARVIRTLEDSPFYARSMVATTLLGERVTLMHESLSLDRFKMPVVQAMLPFRMPRRK
Sequences:
>Translated_317_residues MIAWPNETDERRAGFNLDVPPNGYAWWYVDAISDDGSEGLTIIAFIGSVFSPYYKFARRDAPADPLNHCALNVALYHSAG KRWTMTERSRGRVARNLHSLLIGPSDLAWDRRALTININEVRAPIPGRIKGRVRVIPQFVTKNNFVLNTDGNHRWWPIAP RSRIEVTLEQPKLSWQGEAYLDCNAGDAPIETGFTHWEWARGALRDKTAILYEAERRDGSRVDLAITFDAQGNMERFTPP PLLPLPRSGWQVSRSARSETDARVIRTLEDSPFYARSMVATTLLGERVTLMHESLSLDRFKMPVVQAMLPFRMPRRK >Mature_317_residues MIAWPNETDERRAGFNLDVPPNGYAWWYVDAISDDGSEGLTIIAFIGSVFSPYYKFARRDAPADPLNHCALNVALYHSAG KRWTMTERSRGRVARNLHSLLIGPSDLAWDRRALTININEVRAPIPGRIKGRVRVIPQFVTKNNFVLNTDGNHRWWPIAP RSRIEVTLEQPKLSWQGEAYLDCNAGDAPIETGFTHWEWARGALRDKTAILYEAERRDGSRVDLAITFDAQGNMERFTPP PLLPLPRSGWQVSRSARSETDARVIRTLEDSPFYARSMVATTLLGERVTLMHESLSLDRFKMPVVQAMLPFRMPRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010791 [H]
Pfam domain/function: PF07143 CrtC [H]
EC number: NA
Molecular weight: Translated: 36145; Mature: 36145
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAWPNETDERRAGFNLDVPPNGYAWWYVDAISDDGSEGLTIIAFIGSVFSPYYKFARRD CCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHCC APADPLNHCALNVALYHSAGKRWTMTERSRGRVARNLHSLLIGPSDLAWDRRALTININE CCCCCHHHHEEEEEEEECCCCEEEECCCHHHHHHHHHHHHEECCCCCCCCCEEEEEEHHH VRAPIPGRIKGRVRVIPQFVTKNNFVLNTDGNHRWWPIAPRSRIEVTLEQPKLSWQGEAY CCCCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCEE LDCNAGDAPIETGFTHWEWARGALRDKTAILYEAERRDGSRVDLAITFDAQGNMERFTPP EECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCC PLLPLPRSGWQVSRSARSETDARVIRTLEDSPFYARSMVATTLLGERVTLMHESLSLDRF CCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEHHHHCCCCHH KMPVVQAMLPFRMPRRK HHHHHHHHHCCCCCCCC >Mature Secondary Structure MIAWPNETDERRAGFNLDVPPNGYAWWYVDAISDDGSEGLTIIAFIGSVFSPYYKFARRD CCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHCC APADPLNHCALNVALYHSAGKRWTMTERSRGRVARNLHSLLIGPSDLAWDRRALTININE CCCCCHHHHEEEEEEEECCCCEEEECCCHHHHHHHHHHHHEECCCCCCCCCEEEEEEHHH VRAPIPGRIKGRVRVIPQFVTKNNFVLNTDGNHRWWPIAPRSRIEVTLEQPKLSWQGEAY CCCCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCEE LDCNAGDAPIETGFTHWEWARGALRDKTAILYEAERRDGSRVDLAITFDAQGNMERFTPP EECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCC PLLPLPRSGWQVSRSARSETDARVIRTLEDSPFYARSMVATTLLGERVTLMHESLSLDRF CCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEHHHHCCCCHH KMPVVQAMLPFRMPRRK HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721699; 1612412 [H]