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The map label for this gene is bchB

Identifier: 86751088

GI number: 86751088

Start: 4545964

End: 4547589

Strand: Reverse

Name: bchB

Synonym: RPB_3980

Alternate gene names: 86751088

Gene position: 4547589-4545964 (Counterclockwise)

Preceding gene: 86751089

Following gene: 162138517

Centisome position: 85.29

GC content: 66.42

Gene sequence:

>1626_bases
ATGCAGCTCACCGTCTGGACCTATGAAGGACCTCCCCATGTCGGCGCGATGCGAATCGCCACCGGGATGGAAGGGCTGCA
CTACGTCCTGCACGCGCCGCAGGGCGACACCTACGCCGATCTGTTGTTCACCATGATCGAGCGCCGCAACAAGCGGCCGC
CGGTGACCTATACGACGTTCGCCGCACGCGACCTCGGTCGCGACACCGCCGAACTGTTCATGACCGCCGCGCGCGACGCC
TATGCGCGGTTCCAGCCGCAGGCGATGATCGTCGGCGCGTCCTGCACCGGCTCGCTGATCCAGGACGATCCGGGCGGGCT
GGCGAAATCGCTCGGCTTCCCGATCCCGGTGATCGCGATCGATCTGCCTGCCTATCAGCGCAAGGAAAACTGGGGCGCCG
CCGAAACCTTCTACCAGCTTGTCCGCGCGCTCGCCGGTCCCAACGCGCCGGCGCCCGGCACCAAGCGTCCGGAGCGCGCG
GCGGGAGTCCGCCCGAGCTGCAATCTGCTGGGGCCGACGGCGCTCGGCTTCCGCCATCGCGACGACATCACCGAAATCAC
CGGGCTGCTCGGCAAGCTCGGCATCGATGTCAACGTTGTCGCCCCGATGGGGTCGACGCCGGCGGATATCGCGCGGCTCG
GCGATGCCGATTTCAACGTGGTGATGTATCCGGAAATCGCCGGGCAGGCGGCGTCCTGGCTGCACCGCATCTTCCATCAG
CCGTTCACCAAGACGGTACCGATCGGCGTGTCCGCGACGCGCGACTTCATTCAGGAAGTGACCGCGCTCGCCGGCATCGA
TCCCGCGCCGATGCTGCAGGCCTCGTCGAGCCGGTTGCCGTGGTACTCGCATTCGGTCGACAGCACTTACCTGACCAACA
AGCGCGTCTTCATCTTCGGCGATGCCACCCACGCGATCGCCGCGGCGCGGATCGCGTCGGAAGAGCTCGGCTTCAAGGTG
GTTGGGCTCGGCAGCTACAGCCGTGAGTTCGGCCGCGAGCTGCGCGAAGCCGCGAAGCGTTACGATGTCGAACCGCTGAT
CACCGACGACTATCTCGAGGTCGAGGCCAAGGTGGCCGAGCTCCACCCCGAGCTGGTGCTCGGCACCCAGATGGAGCGCC
ACATCGCCAAGCGGCTCGGCGTTCCCTGCGCGGTGATCTCGGCGCCGGTGCACGTTCAGGATTTCCCGGCGCGCTACGCG
CCGCAGATGGGCTTCGAAGGCGCCAATGTGATCTTCGACACCTGGGTGCATCCGCTGATGATGGGCCTGGAAGAGCATCT
GCTGACGATGTTCAAGGACGATTTCGAATTCAAGGACGGGGCGATGCCGTCGCATCTCGGGACCGGCCACGCCGCGCCGG
TCGCGGAAGCCGTCGCCGCTCCGGCTGCCGCTGTCGCGACCGAATCCGTCGCGACCGGAGTCGCCGCGCCCGACATCGCG
TCGGCAACCGCTGTGGCCGCAGCCGCAGCCGTGTGGGCGCCCGAAGCCGAGAAGGAACTGCAGAAGATACCGTTCTTCGT
TCGCGGGAAAGCCCGCCGGAATACCGAGCGATTCGCCAACGAGAATGGCGTCGCAACCATCACTGTCGAGACCTTGTACG
ATGCAAAAGCGCACTTCGCACGCTGA

Upstream 100 bases:

>100_bases
AACTCGTCTTCACCCCGATCCAGGGGTACGAGCAGGCGGCCGACCTCGCTGAATTGTTCGCGCGCCCGCTCGTCCGTCGC
GCCAAGCTGGTGGCCTGATC

Downstream 100 bases:

>100_bases
CAAGACGCCAGTTCGTGTCGTCATCGTTACTATGGACAGCCATCTGTCCGGCGCCGCCGCGCGCGCGCGGGATCTGCTGC
GTCGCGACTATCCCGGGCTC

Product: light-independent protochlorophyllide reductase subunit B

Products: NA

Alternate protein names: DPOR subunit B; LI-POR subunit B

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MQLTVWTYEGPPHVGAMRIATGMEGLHYVLHAPQGDTYADLLFTMIERRNKRPPVTYTTFAARDLGRDTAELFMTAARDA
YARFQPQAMIVGASCTGSLIQDDPGGLAKSLGFPIPVIAIDLPAYQRKENWGAAETFYQLVRALAGPNAPAPGTKRPERA
AGVRPSCNLLGPTALGFRHRDDITEITGLLGKLGIDVNVVAPMGSTPADIARLGDADFNVVMYPEIAGQAASWLHRIFHQ
PFTKTVPIGVSATRDFIQEVTALAGIDPAPMLQASSSRLPWYSHSVDSTYLTNKRVFIFGDATHAIAAARIASEELGFKV
VGLGSYSREFGRELREAAKRYDVEPLITDDYLEVEAKVAELHPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYA
PQMGFEGANVIFDTWVHPLMMGLEEHLLTMFKDDFEFKDGAMPSHLGTGHAAPVAEAVAAPAAAVATESVATGVAAPDIA
SATAVAAAAAVWAPEAEKELQKIPFFVRGKARRNTERFANENGVATITVETLYDAKAHFAR

Sequences:

>Translated_541_residues
MQLTVWTYEGPPHVGAMRIATGMEGLHYVLHAPQGDTYADLLFTMIERRNKRPPVTYTTFAARDLGRDTAELFMTAARDA
YARFQPQAMIVGASCTGSLIQDDPGGLAKSLGFPIPVIAIDLPAYQRKENWGAAETFYQLVRALAGPNAPAPGTKRPERA
AGVRPSCNLLGPTALGFRHRDDITEITGLLGKLGIDVNVVAPMGSTPADIARLGDADFNVVMYPEIAGQAASWLHRIFHQ
PFTKTVPIGVSATRDFIQEVTALAGIDPAPMLQASSSRLPWYSHSVDSTYLTNKRVFIFGDATHAIAAARIASEELGFKV
VGLGSYSREFGRELREAAKRYDVEPLITDDYLEVEAKVAELHPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYA
PQMGFEGANVIFDTWVHPLMMGLEEHLLTMFKDDFEFKDGAMPSHLGTGHAAPVAEAVAAPAAAVATESVATGVAAPDIA
SATAVAAAAAVWAPEAEKELQKIPFFVRGKARRNTERFANENGVATITVETLYDAKAHFAR
>Mature_541_residues
MQLTVWTYEGPPHVGAMRIATGMEGLHYVLHAPQGDTYADLLFTMIERRNKRPPVTYTTFAARDLGRDTAELFMTAARDA
YARFQPQAMIVGASCTGSLIQDDPGGLAKSLGFPIPVIAIDLPAYQRKENWGAAETFYQLVRALAGPNAPAPGTKRPERA
AGVRPSCNLLGPTALGFRHRDDITEITGLLGKLGIDVNVVAPMGSTPADIARLGDADFNVVMYPEIAGQAASWLHRIFHQ
PFTKTVPIGVSATRDFIQEVTALAGIDPAPMLQASSSRLPWYSHSVDSTYLTNKRVFIFGDATHAIAAARIASEELGFKV
VGLGSYSREFGRELREAAKRYDVEPLITDDYLEVEAKVAELHPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYA
PQMGFEGANVIFDTWVHPLMMGLEEHLLTMFKDDFEFKDGAMPSHLGTGHAAPVAEAVAAPAAAVATESVATGVAAPDIA
SATAVAAAAAVWAPEAEKELQKIPFFVRGKARRNTERFANENGVATITVETLYDAKAHFAR

Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ChlB/BchB/BchZ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BCHB_RHOP2 (Q2ISY7)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_487584.1
- STRING:   Q2ISY7
- GeneID:   3911787
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_3980
- eggNOG:   COG2710
- HOGENOM:   HBG284444
- OMA:   TQMERHS
- ProtClustDB:   PRK02910
- BioCyc:   RPAL316058:RPB_3980-MONOMER
- HAMAP:   MF_00353
- InterPro:   IPR000510
- InterPro:   IPR013580
- InterPro:   IPR005969
- InterPro:   IPR016209
- PIRSF:   PIRSF000163
- TIGRFAMs:   TIGR01278

Pfam domain/function: PF00148 Oxidored_nitro; PF08369 PCP_red

EC number: 1.18.-.-

Molecular weight: Translated: 58488; Mature: 58488

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTVWTYEGPPHVGAMRIATGMEGLHYVLHAPQGDTYADLLFTMIERRNKRPPVTYTTF
CEEEEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEH
AARDLGRDTAELFMTAARDAYARFQPQAMIVGASCTGSLIQDDPGGLAKSLGFPIPVIAI
HHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEE
DLPAYQRKENWGAAETFYQLVRALAGPNAPAPGTKRPERAAGVRPSCNLLGPTALGFRHR
ECCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCC
DDITEITGLLGKLGIDVNVVAPMGSTPADIARLGDADFNVVMYPEIAGQAASWLHRIFHQ
CHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHC
PFTKTVPIGVSATRDFIQEVTALAGIDPAPMLQASSSRLPWYSHSVDSTYLTNKRVFIFG
CCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCEEEECCEEEEEE
DATHAIAAARIASEELGFKVVGLGSYSREFGRELREAAKRYDVEPLITDDYLEVEAKVAE
CHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LHPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYAPQMGFEGANVIFDTWVHPLM
HCCHHHCCCHHHHHHHHHHCCCEEECCCCCEECCCCHHHCCCCCCCCCCHHHHHHHHHHH
MGLEEHLLTMFKDDFEFKDGAMPSHLGTGHAAPVAEAVAAPAAAVATESVATGVAAPDIA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHH
SATAVAAAAAVWAPEAEKELQKIPFFVRGKARRNTERFANENGVATITVETLYDAKAHFA
HHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCHHHHCCCCCEEEEEEEHHHCCHHHCC
R
C
>Mature Secondary Structure
MQLTVWTYEGPPHVGAMRIATGMEGLHYVLHAPQGDTYADLLFTMIERRNKRPPVTYTTF
CEEEEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEH
AARDLGRDTAELFMTAARDAYARFQPQAMIVGASCTGSLIQDDPGGLAKSLGFPIPVIAI
HHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEE
DLPAYQRKENWGAAETFYQLVRALAGPNAPAPGTKRPERAAGVRPSCNLLGPTALGFRHR
ECCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCC
DDITEITGLLGKLGIDVNVVAPMGSTPADIARLGDADFNVVMYPEIAGQAASWLHRIFHQ
CHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHC
PFTKTVPIGVSATRDFIQEVTALAGIDPAPMLQASSSRLPWYSHSVDSTYLTNKRVFIFG
CCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCEEEECCEEEEEE
DATHAIAAARIASEELGFKVVGLGSYSREFGRELREAAKRYDVEPLITDDYLEVEAKVAE
CHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LHPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYAPQMGFEGANVIFDTWVHPLM
HCCHHHCCCHHHHHHHHHHCCCEEECCCCCEECCCCHHHCCCCCCCCCCHHHHHHHHHHH
MGLEEHLLTMFKDDFEFKDGAMPSHLGTGHAAPVAEAVAAPAAAVATESVATGVAAPDIA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHH
SATAVAAAAAVWAPEAEKELQKIPFFVRGKARRNTERFANENGVATITVETLYDAKAHFA
HHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCHHHHCCCCCEEEEEEEHHHCCHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA