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The map label for this gene is 86750943

Identifier: 86750943

GI number: 86750943

Start: 4379278

End: 4380102

Strand: Direct

Name: 86750943

Synonym: RPB_3835

Alternate gene names: NA

Gene position: 4379278-4380102 (Clockwise)

Preceding gene: 86750942

Following gene: 86750944

Centisome position: 82.14

GC content: 57.82

Gene sequence:

>825_bases
ATGAGCGTTCGAAAGACACTAGCAATTGCCTGTTTGACCATTGCCGCATCTGCAACCACCGCCAGCGCCGACTGTCGCCA
GATCGACAACGCTGGCTCGTACGCCGACGGCACGTGGCTGTACAGAAAGAACGGTGGCTGGTGGCCAATTGGAGCTCTCA
CGGCGGAGATCGCGAACGGTCGCCAACGAACGATGACATTCGCTTACATCGCACGCGACGCCGCGTTGCGTGCCGCGCGC
CGTGGGATCTTGATCATCAAGACCGGCGTCGAAGGACCCTATGCCACCAATACCGGTCGCGTCGCGCTCATACGGGAAAA
CTACACGCGTTACCATCCATCGGAGACATGCGAGAACTATCCGAATTTTCCGTCCAACAAGAGCGTGAGGATACGCTCTT
ACGATTTTTACCACGACTATGGTGAGATCACGGATCGCGCCGATAGCAAGACGCTTCAGAATTTTCATGTGAGCTATCTG
ACACAACCGCGCGGATGCAAGCGCTCGGACGACGCGAACGCTGATCCTTACCAAGGCCGGAGCAACGCATCTGACTTTTC
GTTCAATCCCGAAATCGTCAAGAGCGGTCAGCGCAGCCAGTTTTGGGCGCAATTCGGCTTCGGCACCGCCTATGCGGAAC
CGTTGGCTGATCGACAGGTCACCATCAAGCGATACATCGCTGATGCGGAGGGCCTCGCCTGCGTGACCTTCGAATCCACC
CTGAGACCGGGAGGCTTCATACGCATCAACGATCTCGAACGCAGGAAAGGCGCCTTCCGGACCGACGAACAGTCGTGGAC
GTGGCCAGGCAGCGCCAAGCAATGA

Upstream 100 bases:

>100_bases
ACGTTTCTTCTCACGCACATGCCAATCGCCCAGCGAGCGAGCAGAACACCTTGCCTTAACTCTTGCCGGCGTGCCGCACA
CGCCGATTGCGGAGGAAGTC

Downstream 100 bases:

>100_bases
TGGACATGCTCGGGGCTGATGCGACGCGACGCGAGCGCACCGAGGGCAAGTCAGTGCAGATGGTTGGCGACGCGCCGGCG
GCTGGGTCGACCGCGACATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSVRKTLAIACLTIAASATTASADCRQIDNAGSYADGTWLYRKNGGWWPIGALTAEIANGRQRTMTFAYIARDAALRAAR
RGILIIKTGVEGPYATNTGRVALIRENYTRYHPSETCENYPNFPSNKSVRIRSYDFYHDYGEITDRADSKTLQNFHVSYL
TQPRGCKRSDDANADPYQGRSNASDFSFNPEIVKSGQRSQFWAQFGFGTAYAEPLADRQVTIKRYIADAEGLACVTFEST
LRPGGFIRINDLERRKGAFRTDEQSWTWPGSAKQ

Sequences:

>Translated_274_residues
MSVRKTLAIACLTIAASATTASADCRQIDNAGSYADGTWLYRKNGGWWPIGALTAEIANGRQRTMTFAYIARDAALRAAR
RGILIIKTGVEGPYATNTGRVALIRENYTRYHPSETCENYPNFPSNKSVRIRSYDFYHDYGEITDRADSKTLQNFHVSYL
TQPRGCKRSDDANADPYQGRSNASDFSFNPEIVKSGQRSQFWAQFGFGTAYAEPLADRQVTIKRYIADAEGLACVTFEST
LRPGGFIRINDLERRKGAFRTDEQSWTWPGSAKQ
>Mature_273_residues
SVRKTLAIACLTIAASATTASADCRQIDNAGSYADGTWLYRKNGGWWPIGALTAEIANGRQRTMTFAYIARDAALRAARR
GILIIKTGVEGPYATNTGRVALIRENYTRYHPSETCENYPNFPSNKSVRIRSYDFYHDYGEITDRADSKTLQNFHVSYLT
QPRGCKRSDDANADPYQGRSNASDFSFNPEIVKSGQRSQFWAQFGFGTAYAEPLADRQVTIKRYIADAEGLACVTFESTL
RPGGFIRINDLERRKGAFRTDEQSWTWPGSAKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30680; Mature: 30549

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRKTLAIACLTIAASATTASADCRQIDNAGSYADGTWLYRKNGGWWPIGALTAEIANG
CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCC
RQRTMTFAYIARDAALRAARRGILIIKTGVEGPYATNTGRVALIRENYTRYHPSETCENY
CHHEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHCC
PNFPSNKSVRIRSYDFYHDYGEITDRADSKTLQNFHVSYLTQPRGCKRSDDANADPYQGR
CCCCCCCEEEEEEEECCCCHHHHHCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC
SNASDFSFNPEIVKSGQRSQFWAQFGFGTAYAEPLADRQVTIKRYIADAEGLACVTFEST
CCCCCCCCCHHHHHCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCCCEEEEEEHHH
LRPGGFIRINDLERRKGAFRTDEQSWTWPGSAKQ
CCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVRKTLAIACLTIAASATTASADCRQIDNAGSYADGTWLYRKNGGWWPIGALTAEIANG
CHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCC
RQRTMTFAYIARDAALRAARRGILIIKTGVEGPYATNTGRVALIRENYTRYHPSETCENY
CHHEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHCC
PNFPSNKSVRIRSYDFYHDYGEITDRADSKTLQNFHVSYLTQPRGCKRSDDANADPYQGR
CCCCCCCEEEEEEEECCCCHHHHHCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC
SNASDFSFNPEIVKSGQRSQFWAQFGFGTAYAEPLADRQVTIKRYIADAEGLACVTFEST
CCCCCCCCCHHHHHCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCCCEEEEEEHHH
LRPGGFIRINDLERRKGAFRTDEQSWTWPGSAKQ
CCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA