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The map label for this gene is ydcQ [C]

Identifier: 86750935

GI number: 86750935

Start: 4371215

End: 4371610

Strand: Direct

Name: ydcQ [C]

Synonym: RPB_3827

Alternate gene names: 86750935

Gene position: 4371215-4371610 (Clockwise)

Preceding gene: 86750933

Following gene: 86750936

Centisome position: 81.99

GC content: 65.4

Gene sequence:

>396_bases
ATGGTTCATTACATCGCGCTGATCCACAAAGACCCCGACAGCGACTACGGCGTGTCGTTTCCGGATCTGCCGGGCGCTAT
CAGCGCCGGCCGCACCCTCGACGAGGCGCGCGACATGGCGGCGGAAGCGCTGGCGCTGCATCTCGAAGGCATGGCGGAGG
ACGGCGAGGCGGTCCCGGAACCGTCGACGCTGGAGAAGATCATGCAGGACCCGCAAAATCGCGACGGCGTCGCAGTGCTG
ATCCCGGTGACGCCACAGGCGGTGCGCTCGGTGCGAATCAACATCACGCTACCCTCCGATCTGCTCGCGCAGATCGACGA
ACATGCCGAGCGCGAGGGCTTCACCCGCTCCGGCTTCCTGGCCCAGGCGGCGAAAAAGACGATGACTACGGCGTAA

Upstream 100 bases:

>100_bases
AAGCCCGGCCGCACCACTGTGCCGCATCCCAAGCGCGACGTCCCGATCGGAACGTTGCGCAGCATCGAACAGCAGTCCGG
CCTGAAACTGAGGTGACGCC

Downstream 100 bases:

>100_bases
CTGATAACGGCGCGCCGCCCGGCTGCTTGCCCGCGCCCTCCCGGTTTCCTACAACGTCCTGGCCGATCGATCGTCGAGGC
CCGATGCCGACATCCGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MVHYIALIHKDPDSDYGVSFPDLPGAISAGRTLDEARDMAAEALALHLEGMAEDGEAVPEPSTLEKIMQDPQNRDGVAVL
IPVTPQAVRSVRINITLPSDLLAQIDEHAEREGFTRSGFLAQAAKKTMTTA

Sequences:

>Translated_131_residues
MVHYIALIHKDPDSDYGVSFPDLPGAISAGRTLDEARDMAAEALALHLEGMAEDGEAVPEPSTLEKIMQDPQNRDGVAVL
IPVTPQAVRSVRINITLPSDLLAQIDEHAEREGFTRSGFLAQAAKKTMTTA
>Mature_131_residues
MVHYIALIHKDPDSDYGVSFPDLPGAISAGRTLDEARDMAAEALALHLEGMAEDGEAVPEPSTLEKIMQDPQNRDGVAVL
IPVTPQAVRSVRINITLPSDLLAQIDEHAEREGFTRSGFLAQAAKKTMTTA

Specific function: Unknown

COG id: COG1598

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14107; Mature: 14107

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHYIALIHKDPDSDYGVSFPDLPGAISAGRTLDEARDMAAEALALHLEGMAEDGEAVPE
CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PSTLEKIMQDPQNRDGVAVLIPVTPQAVRSVRINITLPSDLLAQIDEHAEREGFTRSGFL
CHHHHHHHHCCCCCCCEEEEEECCHHHHHEEEEEEECCHHHHHHHHHHHHHCCCCCCCHH
AQAAKKTMTTA
HHHHHHHHCCC
>Mature Secondary Structure
MVHYIALIHKDPDSDYGVSFPDLPGAISAGRTLDEARDMAAEALALHLEGMAEDGEAVPE
CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PSTLEKIMQDPQNRDGVAVLIPVTPQAVRSVRINITLPSDLLAQIDEHAEREGFTRSGFL
CHHHHHHHHCCCCCCCEEEEEECCHHHHHEEEEEEECCHHHHHHHHHHHHHCCCCCCCHH
AQAAKKTMTTA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA