| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750905
Identifier: 86750905
GI number: 86750905
Start: 4331256
End: 4331750
Strand: Direct
Name: 86750905
Synonym: RPB_3796
Alternate gene names: NA
Gene position: 4331256-4331750 (Clockwise)
Preceding gene: 86750904
Following gene: 86750906
Centisome position: 81.24
GC content: 67.27
Gene sequence:
>495_bases ATGACGCAGATGCAACGCCCGCAGCCCCCCGCTCCCGCCCCGGTTCAACCGGTCGCGTCGCCGGCCGACGCGCGCAAACT CGCCAACGGCCTGACCGAGGTCATGAACGCGCTTCTGGCGGTGATCGAACGCGAAACCGAACTGGTCCGCGCCGGCAAGA TCCCGGATGCGCTGCGGCTCGAGAGCCAGAAGAACGAGCTGACGAAAAGCTACATCACCGCGATCACGCTGGTGAAGGCG AGTCAGCCTTATATGGCGAAGGCGACGCCCGATTTGCTCGGCGCACTGCATCGCCACCACGAGGTGTTCCGCGCCATGCT GCAGGTCAACCTCACGGTGCTCGCCACCGCCCACGCGGTGTCGGAAGGCATCGTGCGCGGCGTCAACGCCGAGATCCAGC GCCGCAACATTCCGCAGACCTACACCGCGGCCGGCAAGCGCACCGTACCCGGCCCGCGCAATCTCACGCCGATCGCCGTC AGCCGCTCGCTCTGA
Upstream 100 bases:
>100_bases CCATCGCCAAGGCCGGCGGCGTCGGCATCGCCAACGACGTGTTCAGGACCCTGATTCTCCAGCAGGCGAACGCCGCAACC TGATCGCAAAGGACGATGCC
Downstream 100 bases:
>100_bases CGGCCGGACCGATCGCAGCCCGCCAAATCGGCGCCGCCGGCCCTCCGCCGGCGGCGTTGTCGTGCGCGGCAATTGAATTA AATGCGCGACCAGCTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTQMQRPQPPAPAPVQPVASPADARKLANGLTEVMNALLAVIERETELVRAGKIPDALRLESQKNELTKSYITAITLVKA SQPYMAKATPDLLGALHRHHEVFRAMLQVNLTVLATAHAVSEGIVRGVNAEIQRRNIPQTYTAAGKRTVPGPRNLTPIAV SRSL
Sequences:
>Translated_164_residues MTQMQRPQPPAPAPVQPVASPADARKLANGLTEVMNALLAVIERETELVRAGKIPDALRLESQKNELTKSYITAITLVKA SQPYMAKATPDLLGALHRHHEVFRAMLQVNLTVLATAHAVSEGIVRGVNAEIQRRNIPQTYTAAGKRTVPGPRNLTPIAV SRSL >Mature_163_residues TQMQRPQPPAPAPVQPVASPADARKLANGLTEVMNALLAVIERETELVRAGKIPDALRLESQKNELTKSYITAITLVKAS QPYMAKATPDLLGALHRHHEVFRAMLQVNLTVLATAHAVSEGIVRGVNAEIQRRNIPQTYTAAGKRTVPGPRNLTPIAVS RSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17781; Mature: 17650
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQMQRPQPPAPAPVQPVASPADARKLANGLTEVMNALLAVIERETELVRAGKIPDALRL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ESQKNELTKSYITAITLVKASQPYMAKATPDLLGALHRHHEVFRAMLQVNLTVLATAHAV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEGIVRGVNAEIQRRNIPQTYTAAGKRTVPGPRNLTPIAVSRSL HHHHHHCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQMQRPQPPAPAPVQPVASPADARKLANGLTEVMNALLAVIERETELVRAGKIPDALRL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ESQKNELTKSYITAITLVKASQPYMAKATPDLLGALHRHHEVFRAMLQVNLTVLATAHAV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEGIVRGVNAEIQRRNIPQTYTAAGKRTVPGPRNLTPIAVSRSL HHHHHHCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA