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The map label for this gene is flgF [H]

Identifier: 86750895

GI number: 86750895

Start: 4321778

End: 4322539

Strand: Direct

Name: flgF [H]

Synonym: RPB_3786

Alternate gene names: 86750895

Gene position: 4321778-4322539 (Clockwise)

Preceding gene: 86750890

Following gene: 86750896

Centisome position: 81.06

GC content: 63.39

Gene sequence:

>762_bases
ATGCAGAATACGCTTCTGGTCGGCTTGTCGCGGCAGGTCGTGCTCGAACGGCAGATGGATGTCGTCGCGAACAATCTGGC
CAACATGAACACCAACGGCTTCAAGGCCCAGCGCTCCGTGTTTCAGGAATACCTGAACACCGGCGCGCATGAGGACAATT
TCCAGAGGCCCGACCGTCGCGTCAGCTTCGTACAGGACCGCGCCGCGTATCTCGATTTTTCCACCGGTCCGATGACCCAG
ACCAAGGACCCGCTCGACGTCGCGATCGACGGCTCGGCGTTCCTGGTCGTCCAGACTCCCGCCGGCGAGCGCTTCACCCG
CGACGGCAAGCTGTCGATCAATCCGCGCGGCCAGTTGGTCAACTCGTCCGGCTATCCGGTGCTCGGCAATTCCGGCCCGA
TCGTGTTCCAGCCGACCGACAAGGCGATCAACATCGCGCAGGACGGCAATGTCAGCGTGGTCGAAGGCACCGCCACCATC
GACTCGCTGCGCGGCAAGCTGCGGCTGGTGTCGTTCGCCCGGCCGCAGAGCCTGGAGAAGCAGGGCGACAATCTGTTCGC
CGCGACCTCCGATCCCGGCGCGCCCGACACCAAGGCCATCGTACGCCAGGGTTACGTCGAGAAATCGAACGTGAACTCGG
TGCTCGAAATGACGCGGATGCTCGACGTCACCCGCTCCTACCAGAAGATGTCGTCGTTGTTGCAGCAGGAAGGCGACCTG
CAGAAGACCGCCATCGAGCGGCTCGCCGAAGTCCCGGCGTAA

Upstream 100 bases:

>100_bases
AGAAACATCGGCGAGCCGCTGCTTGGGAGAGCGCCGGTTCGAGGCGATCCGCGGAAGGTCTGGGAGGACCGGGGGCGGAT
CCGAGAAGGGAGAACCACCG

Downstream 100 bases:

>100_bases
GGAGAACGACGATGCGCGCACTCTACACAGCGGCGACCGGCATGGCCGCCCAGGAGCTCAACGTCCAGGTGATCTCCAAC
AACATCGCCAATATGCGGAC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MQNTLLVGLSRQVVLERQMDVVANNLANMNTNGFKAQRSVFQEYLNTGAHEDNFQRPDRRVSFVQDRAAYLDFSTGPMTQ
TKDPLDVAIDGSAFLVVQTPAGERFTRDGKLSINPRGQLVNSSGYPVLGNSGPIVFQPTDKAINIAQDGNVSVVEGTATI
DSLRGKLRLVSFARPQSLEKQGDNLFAATSDPGAPDTKAIVRQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEGDL
QKTAIERLAEVPA

Sequences:

>Translated_253_residues
MQNTLLVGLSRQVVLERQMDVVANNLANMNTNGFKAQRSVFQEYLNTGAHEDNFQRPDRRVSFVQDRAAYLDFSTGPMTQ
TKDPLDVAIDGSAFLVVQTPAGERFTRDGKLSINPRGQLVNSSGYPVLGNSGPIVFQPTDKAINIAQDGNVSVVEGTATI
DSLRGKLRLVSFARPQSLEKQGDNLFAATSDPGAPDTKAIVRQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEGDL
QKTAIERLAEVPA
>Mature_253_residues
MQNTLLVGLSRQVVLERQMDVVANNLANMNTNGFKAQRSVFQEYLNTGAHEDNFQRPDRRVSFVQDRAAYLDFSTGPMTQ
TKDPLDVAIDGSAFLVVQTPAGERFTRDGKLSINPRGQLVNSSGYPVLGNSGPIVFQPTDKAINIAQDGNVSVVEGTATI
DSLRGKLRLVSFARPQSLEKQGDNLFAATSDPGAPDTKAIVRQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEGDL
QKTAIERLAEVPA

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=227, Percent_Identity=35.6828193832599, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1787317, Length=221, Percent_Identity=32.579185520362, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 27709; Mature: 27709

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNTLLVGLSRQVVLERQMDVVANNLANMNTNGFKAQRSVFQEYLNTGAHEDNFQRPDRR
CCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
VSFVQDRAAYLDFSTGPMTQTKDPLDVAIDGSAFLVVQTPAGERFTRDGKLSINPRGQLV
HHHHHHHHHEEECCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCEE
NSSGYPVLGNSGPIVFQPTDKAINIAQDGNVSVVEGTATIDSLRGKLRLVSFARPQSLEK
CCCCCEEECCCCCEEECCCCCEEEEECCCCEEEEECCHHHHHHCCCEEEEECCCCHHHHH
QGDNLFAATSDPGAPDTKAIVRQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEGDL
CCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QKTAIERLAEVPA
HHHHHHHHHHCCC
>Mature Secondary Structure
MQNTLLVGLSRQVVLERQMDVVANNLANMNTNGFKAQRSVFQEYLNTGAHEDNFQRPDRR
CCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
VSFVQDRAAYLDFSTGPMTQTKDPLDVAIDGSAFLVVQTPAGERFTRDGKLSINPRGQLV
HHHHHHHHHEEECCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCEE
NSSGYPVLGNSGPIVFQPTDKAINIAQDGNVSVVEGTATIDSLRGKLRLVSFARPQSLEK
CCCCCEEECCCCCEEECCCCCEEEEECCCCEEEEECCHHHHHHCCCEEEEECCCCHHHHH
QGDNLFAATSDPGAPDTKAIVRQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEGDL
CCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QKTAIERLAEVPA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]