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The map label for this gene is fliP [H]

Identifier: 86750888

GI number: 86750888

Start: 4313089

End: 4313853

Strand: Direct

Name: fliP [H]

Synonym: RPB_3779

Alternate gene names: 86750888

Gene position: 4313089-4313853 (Clockwise)

Preceding gene: 86750887

Following gene: 86750890

Centisome position: 80.9

GC content: 64.84

Gene sequence:

>765_bases
GTGAGCCGCCCGGCCACACCGCGTAGAGTTGTTCTTTTTCTCACCGTCCTGATCGCCGCCGCAGCCGCGCTGGCGGCGCC
TGCCCATGCGCAGGACGTCAGCATCAATCTCGGCGGCGGCGGCACCGGAGTCACCGAGCGCGCGATCCAGTTGATCGCAT
TGCTGACGGTGCTGTCGATCGCGCCGTCGATCCTGATCATGATGACGTCGTTCACCCGGATCGTGGTGGTGCTGTCGCTG
CTGCGCACCGCGCTCGGCACCGCGACCGCGCCGCCCAACATGGTGATCATCGCGCTGGCGCTGTTCCTCACCGCCTTCGT
GATGGGGCCGACGCTGCAGAAATCCTACGACGACGGCATCAAGCCGCTGATCGCCAACGAGATGAGCGTCGAGGACGCGC
TGGTGCGCGCCTCCGGCCCGCTGCGGATCTTCATGCAGAAGAACGTGCGCGAGAAGGACCTCAAACTGTTCCTCGACCTC
TCCGGCGAGCCGCCGCCGGCGACGCCGGAAGATTTGTCGCTGCGCATCCTGATGCCGGCCTTCATGATCTCCGAACTGAA
GCGCGCCTTCGAGATCGGCTTCCTGCTGTTCCTGCCGTTCCTGATCATCGACCTCGTCGTCGCCTCGGTGCTGATGTCGA
TGGGCATGATGATGCTGCCGCCGGTGGTGGTGTCGCTTCCGTTCAAGTTGATCTTCTTCGTGCTGGTCGACGGCTGGTCG
CTGGTCGCCGGCTCGCTGGTGCAGAGCTATTCGGGTAGCGGGTAG

Upstream 100 bases:

>100_bases
CGCCCGAGCCGCCGACCGCCCCGCCCGCAGCGCCGAAATCGGGGTTCGAGAGCCTCGAAGACGAGATGGCGTCGCTGCTG
GGGCGTCCGAAGACTCCTTC

Downstream 100 bases:

>100_bases
TTCTGACGTCGCACGGGCCGTGTTTCGTCCGCGCTCTCCCCGAGTCATTCCGGGGCGCGCCGCAAGGCGCGAACCCGGAA
TCTCGGCCGCGCAAACAACC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSRPATPRRVVLFLTVLIAAAAALAAPAHAQDVSINLGGGGTGVTERAIQLIALLTVLSIAPSILIMMTSFTRIVVVLSL
LRTALGTATAPPNMVIIALALFLTAFVMGPTLQKSYDDGIKPLIANEMSVEDALVRASGPLRIFMQKNVREKDLKLFLDL
SGEPPPATPEDLSLRILMPAFMISELKRAFEIGFLLFLPFLIIDLVVASVLMSMGMMMLPPVVVSLPFKLIFFVLVDGWS
LVAGSLVQSYSGSG

Sequences:

>Translated_254_residues
MSRPATPRRVVLFLTVLIAAAAALAAPAHAQDVSINLGGGGTGVTERAIQLIALLTVLSIAPSILIMMTSFTRIVVVLSL
LRTALGTATAPPNMVIIALALFLTAFVMGPTLQKSYDDGIKPLIANEMSVEDALVRASGPLRIFMQKNVREKDLKLFLDL
SGEPPPATPEDLSLRILMPAFMISELKRAFEIGFLLFLPFLIIDLVVASVLMSMGMMMLPPVVVSLPFKLIFFVLVDGWS
LVAGSLVQSYSGSG
>Mature_253_residues
SRPATPRRVVLFLTVLIAAAAALAAPAHAQDVSINLGGGGTGVTERAIQLIALLTVLSIAPSILIMMTSFTRIVVVLSLL
RTALGTATAPPNMVIIALALFLTAFVMGPTLQKSYDDGIKPLIANEMSVEDALVRASGPLRIFMQKNVREKDLKLFLDLS
GEPPPATPEDLSLRILMPAFMISELKRAFEIGFLLFLPFLIIDLVVASVLMSMGMMMLPPVVVSLPFKLIFFVLVDGWSL
VAGSLVQSYSGSG

Specific function: May be a component of the flagellum. It is required for normal cell division. May be implicated in the secretion of virulence factors [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=243, Percent_Identity=49.7942386831276, Blast_Score=227, Evalue=6e-61,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27151; Mature: 27020

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPATPRRVVLFLTVLIAAAAALAAPAHAQDVSINLGGGGTGVTERAIQLIALLTVLSI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
APSILIMMTSFTRIVVVLSLLRTALGTATAPPNMVIIALALFLTAFVMGPTLQKSYDDGI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCC
KPLIANEMSVEDALVRASGPLRIFMQKNVREKDLKLFLDLSGEPPPATPEDLSLRILMPA
CHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEECCCCCCCCCCCCCCHHHHHHH
FMISELKRAFEIGFLLFLPFLIIDLVVASVLMSMGMMMLPPVVVSLPFKLIFFVLVDGWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH
LVAGSLVQSYSGSG
HHHHHHHHHCCCCC
>Mature Secondary Structure 
SRPATPRRVVLFLTVLIAAAAALAAPAHAQDVSINLGGGGTGVTERAIQLIALLTVLSI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
APSILIMMTSFTRIVVVLSLLRTALGTATAPPNMVIIALALFLTAFVMGPTLQKSYDDGI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCC
KPLIANEMSVEDALVRASGPLRIFMQKNVREKDLKLFLDLSGEPPPATPEDLSLRILMPA
CHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEECCCCCCCCCCCCCCHHHHHHH
FMISELKRAFEIGFLLFLPFLIIDLVVASVLMSMGMMMLPPVVVSLPFKLIFFVLVDGWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH
LVAGSLVQSYSGSG
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7601828; 11259647 [H]