| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750867
Identifier: 86750867
GI number: 86750867
Start: 4293822
End: 4294220
Strand: Direct
Name: 86750867
Synonym: RPB_3758
Alternate gene names: NA
Gene position: 4293822-4294220 (Clockwise)
Preceding gene: 86750864
Following gene: 86750869
Centisome position: 80.53
GC content: 71.18
Gene sequence:
>399_bases ATGATCCGACCGTCCGTGCTGCTCCGCCGCGCGCTGCAAGCCGATGCGCTGGTCAGCGGCGCGATGGCGCTGCTGTGCGC ATTCGGCGCCGGCGCGCTGTCACCGCTGCTGGCGCTGCCGCAGCCGCTGTTGCTCGAGACCGGGCTGTTCCTGATCGCCT ATGCGGCCTTCGTCGGCTGGCTCGCTACCCGCGCCGCGCTGATCCGGCCACTGGTGCTGCTGGTGATCGTCGGCAACGCG CTGTGGACGCTCGGCAGCATCGCGCTGCTGATCAGCGGCGCGGTGACACCCAACGCGCTCGGCATCGCCTTCGTGGTGAT GCAGGCGATCGCCGTCGGCGTGTTCGCCGAGCTGCAGTTCATCGGGCTGCGGCGGAGCGAGCGGGCGGTGACGGCCTGA
Upstream 100 bases:
>100_bases ATCACGCGTCCGTCGCAGCTTCCATGACCTGCGGGGTAATCGAATTCGGCAGCGGAGGCGGTCAGGGTGGCGCATCGCAA CCGAACCGAAGGAGACCACC
Downstream 100 bases:
>100_bases GGCCGTCATTGCGAGCGCAGCGAAGCAATCCACGCGCCGAGCGCGGAGCTGGATTGCTTTGTCGCTTCGCTCCTCGCAAT GACGTCGAGGAGCTTCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIRPSVLLRRALQADALVSGAMALLCAFGAGALSPLLALPQPLLLETGLFLIAYAAFVGWLATRAALIRPLVLLVIVGNA LWTLGSIALLISGAVTPNALGIAFVVMQAIAVGVFAELQFIGLRRSERAVTA
Sequences:
>Translated_132_residues MIRPSVLLRRALQADALVSGAMALLCAFGAGALSPLLALPQPLLLETGLFLIAYAAFVGWLATRAALIRPLVLLVIVGNA LWTLGSIALLISGAVTPNALGIAFVVMQAIAVGVFAELQFIGLRRSERAVTA >Mature_132_residues MIRPSVLLRRALQADALVSGAMALLCAFGAGALSPLLALPQPLLLETGLFLIAYAAFVGWLATRAALIRPLVLLVIVGNA LWTLGSIALLISGAVTPNALGIAFVVMQAIAVGVFAELQFIGLRRSERAVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13705; Mature: 13705
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPSVLLRRALQADALVSGAMALLCAFGAGALSPLLALPQPLLLETGLFLIAYAAFVGW CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LATRAALIRPLVLLVIVGNALWTLGSIALLISGAVTPNALGIAFVVMQAIAVGVFAELQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IGLRRSERAVTA HHCCCCCCCCCC >Mature Secondary Structure MIRPSVLLRRALQADALVSGAMALLCAFGAGALSPLLALPQPLLLETGLFLIAYAAFVGW CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LATRAALIRPLVLLVIVGNALWTLGSIALLISGAVTPNALGIAFVVMQAIAVGVFAELQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IGLRRSERAVTA HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA