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The map label for this gene is rpe [H]

Identifier: 86750799

GI number: 86750799

Start: 4229098

End: 4229796

Strand: Direct

Name: rpe [H]

Synonym: RPB_3689

Alternate gene names: 86750799

Gene position: 4229098-4229796 (Clockwise)

Preceding gene: 86750797

Following gene: 86750801

Centisome position: 79.32

GC content: 65.67

Gene sequence:

>699_bases
ATGACCCAGCTCGCGCCCCGCCCCCTCGTCATCGCGCCGTCGATCCTGGCGTCGGATTTCTCCAGGCTCGGCGAAGAGGT
CCGCGCGGTCGATCAGGCCGGCGCCGACTGGATCCATCTCGACGTGATGGACGGGCATTTCGTGCCGAACATTTCCTACG
GCCCCGACGTCATCAAGGCGATGCGGCCGCACACCACCAAGATCTTCGACGCGCATCTGATGATCGCGCCGTGCGATCCC
TATCTCGAAGCCTTCGCCAAAGCCGGCTGCGACCACATCACCATCCACGCCGAAGCCGGTCCCCATCTGCACCGCTCGCT
GCAGGCGATCCGCGCGCTCGGCAAGAAGGCCGGCGTCTCGCTCAACCCGTCGACGCCGGCCTCCGCGCTGGAATACGTCA
TCGACATGATCGACCTGGTGCTGGTGATGTCGGTCAACCCCGGCTTCGGCGGCCAGGCCTTCATCCCCTCCGCGATCAAC
AAGATCCAGGACATCCGCGCGATGACCGCGGGCCGCCCGATCGACATCGAAGTCGACGGCGGGGTGAGCGACAAAGTGTC
GGGGCAAATAGCAGCCGCCGGCGCCAACGCGTTCGTGGCGGGCAGCGCGGTGTTCAAGGGCGGCACGGTGGAGAGCTACA
AGGCGAATATCGACGCGATCAGGAATGCGGCGGCGATGGCGAGAGGAGAAGTGGTTTAG

Upstream 100 bases:

>100_bases
GCCCCATCGGTGCACCGCGGCAGCTTGCGGGGCCGCATTGCGAGGTCCCGGTCCGCGTGATAGCGAGGCTGATCGCTCTC
ACGCCGCACCGGAAGCTCCC

Downstream 100 bases:

>100_bases
CTTTCCGCCGTCATTGCCGGGCTCGACCCGGCAATCCATCCTCTTCGTAAGATGCACTTCGGTCCGCGCGCTTCGCGCGC
GATGGATGCGCGGGTCAAGC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTQLAPRPLVIAPSILASDFSRLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIKAMRPHTTKIFDAHLMIAPCDP
YLEAFAKAGCDHITIHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPASALEYVIDMIDLVLVMSVNPGFGGQAFIPSAIN
KIQDIRAMTAGRPIDIEVDGGVSDKVSGQIAAAGANAFVAGSAVFKGGTVESYKANIDAIRNAAAMARGEVV

Sequences:

>Translated_232_residues
MTQLAPRPLVIAPSILASDFSRLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIKAMRPHTTKIFDAHLMIAPCDP
YLEAFAKAGCDHITIHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPASALEYVIDMIDLVLVMSVNPGFGGQAFIPSAIN
KIQDIRAMTAGRPIDIEVDGGVSDKVSGQIAAAGANAFVAGSAVFKGGTVESYKANIDAIRNAAAMARGEVV
>Mature_231_residues
TQLAPRPLVIAPSILASDFSRLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIKAMRPHTTKIFDAHLMIAPCDPY
LEAFAKAGCDHITIHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPASALEYVIDMIDLVLVMSVNPGFGGQAFIPSAINK
IQDIRAMTAGRPIDIEVDGGVSDKVSGQIAAAGANAFVAGSAVFKGGTVESYKANIDAIRNAAAMARGEVV

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=219, Percent_Identity=39.2694063926941, Blast_Score=154, Evalue=6e-38,
Organism=Homo sapiens, GI219879828, Length=219, Percent_Identity=37.4429223744292, Blast_Score=144, Evalue=6e-35,
Organism=Homo sapiens, GI24307923, Length=174, Percent_Identity=31.6091954022989, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI1789788, Length=227, Percent_Identity=48.4581497797357, Blast_Score=208, Evalue=2e-55,
Organism=Escherichia coli, GI1790523, Length=198, Percent_Identity=36.8686868686869, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1790754, Length=209, Percent_Identity=33.0143540669856, Blast_Score=105, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17552948, Length=226, Percent_Identity=38.0530973451327, Blast_Score=147, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6322341, Length=209, Percent_Identity=40.1913875598086, Blast_Score=157, Evalue=9e-40,
Organism=Drosophila melanogaster, GI24586301, Length=195, Percent_Identity=40, Blast_Score=145, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24375; Mature: 24244

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLAPRPLVIAPSILASDFSRLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIKA
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH
MRPHTTKIFDAHLMIAPCDPYLEAFAKAGCDHITIHAEAGPHLHRSLQAIRALGKKAGVS
CCCCCCEEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
LNPSTPASALEYVIDMIDLVLVMSVNPGFGGQAFIPSAINKIQDIRAMTAGRPIDIEVDG
CCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
GVSDKVSGQIAAAGANAFVAGSAVFKGGTVESYKANIDAIRNAAAMARGEVV
CCCCCCCCEEEECCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQLAPRPLVIAPSILASDFSRLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIKA
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH
MRPHTTKIFDAHLMIAPCDPYLEAFAKAGCDHITIHAEAGPHLHRSLQAIRALGKKAGVS
CCCCCCEEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
LNPSTPASALEYVIDMIDLVLVMSVNPGFGGQAFIPSAINKIQDIRAMTAGRPIDIEVDG
CCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
GVSDKVSGQIAAAGANAFVAGSAVFKGGTVESYKANIDAIRNAAAMARGEVV
CCCCCCCCEEEECCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]