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The map label for this gene is yqeB [H]

Identifier: 86750783

GI number: 86750783

Start: 4213905

End: 4214606

Strand: Reverse

Name: yqeB [H]

Synonym: RPB_3673

Alternate gene names: 86750783

Gene position: 4214606-4213905 (Counterclockwise)

Preceding gene: 86750784

Following gene: 86750782

Centisome position: 79.05

GC content: 67.52

Gene sequence:

>702_bases
GTGAAGCTCGAAACATTGCAACAACTCAATGCCGAGCGCGCCGCCCGGCGGCCGGCGATCGTCGTCACCGACACCGCGAC
CGGCGAGCAGCGCCTCGTCAAAGCCGCCGAGATCGCCGCCGATCCGCTCGCCGCCGAACTGTCGAAGCAATTGCGGATGG
GCAAGAGTGCGACCATCGAGGCCGGCGACCGCAAGTTGTTTCTCAACGTCTACGCGCCGACCGCCAAGCTGGTGATCGTC
GGCGCGGTGCATATCAGTCAGGCGCTGGCGCCGCTCGCCCGTTCGCTCGGCTACGATGTCACCGTGGTCGATCCGCGCAC
CGCGTTCGCGAGCCCGGAGCGTTTCCCCGACGTGCCGCTGATCGCCGAATGGCCCGATGTCGCGCTGCCGCCGCTGAACG
TCGATCACTACACGGCGTTCGTCGCGCTGACGCATGATCCGAAGATCGACGATCCGGCACTGCTGCACGCCTTTGCGCGC
GACTGCTTCTATATCGGCGCGCTCGGCTCGAAGAAGACCCATGCCCGGCGCGTCGACCGCCTGAAAGAGCAGGGCGCGAG
CGACGCCGACGTCGCGCGCATTCACGCCCCGATTGGGCTCGCCATCGGCGCGGTGTCGCCGTCGGAAATTGCGGTGTCGA
TCATGGCCGAGATCACCGCGACGCTGCGGATGCCGGGGCCGTCCAAGGCAGCCGCGGTATGA

Upstream 100 bases:

>100_bases
GAGACCGCCTGGAAGGTCGGGCTGTCCTGCGGCGGCACTATCCGGGTGTTCGTCGAAAAGGTCGGTTAGTTCGACCAGCG
AAACAAGTGGGGCGGTCTCC

Downstream 100 bases:

>100_bases
AGTTCGGGCCGCGCCGTCCGGCCGATGCGATCGGCGGCGTCACCGTGCATTCGCTGCGGCAGAACGGATTGCTGCTGAAG
AAGGGCACCGCGATCGGTCC

Product: xanthine dehydrogenase accessory factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKLETLQQLNAERAARRPAIVVTDTATGEQRLVKAAEIAADPLAAELSKQLRMGKSATIEAGDRKLFLNVYAPTAKLVIV
GAVHISQALAPLARSLGYDVTVVDPRTAFASPERFPDVPLIAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFAR
DCFYIGALGSKKTHARRVDRLKEQGASDADVARIHAPIGLAIGAVSPSEIAVSIMAEITATLRMPGPSKAAAV

Sequences:

>Translated_233_residues
MKLETLQQLNAERAARRPAIVVTDTATGEQRLVKAAEIAADPLAAELSKQLRMGKSATIEAGDRKLFLNVYAPTAKLVIV
GAVHISQALAPLARSLGYDVTVVDPRTAFASPERFPDVPLIAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFAR
DCFYIGALGSKKTHARRVDRLKEQGASDADVARIHAPIGLAIGAVSPSEIAVSIMAEITATLRMPGPSKAAAV
>Mature_233_residues
MKLETLQQLNAERAARRPAIVVTDTATGEQRLVKAAEIAADPLAAELSKQLRMGKSATIEAGDRKLFLNVYAPTAKLVIV
GAVHISQALAPLARSLGYDVTVVDPRTAFASPERFPDVPLIAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFAR
DCFYIGALGSKKTHARRVDRLKEQGASDADVARIHAPIGLAIGAVSPSEIAVSIMAEITATLRMPGPSKAAAV

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=162, Percent_Identity=32.0987654320988, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 24808; Mature: 24808

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLETLQQLNAERAARRPAIVVTDTATGEQRLVKAAEIAADPLAAELSKQLRMGKSATIE
CCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE
AGDRKLFLNVYAPTAKLVIVGAVHISQALAPLARSLGYDVTVVDPRTAFASPERFPDVPL
CCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCE
IAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFARDCFYIGALGSKKTHARRVDR
EECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHH
LKEQGASDADVARIHAPIGLAIGAVSPSEIAVSIMAEITATLRMPGPSKAAAV
HHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MKLETLQQLNAERAARRPAIVVTDTATGEQRLVKAAEIAADPLAAELSKQLRMGKSATIE
CCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE
AGDRKLFLNVYAPTAKLVIVGAVHISQALAPLARSLGYDVTVVDPRTAFASPERFPDVPL
CCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCE
IAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFARDCFYIGALGSKKTHARRVDR
EECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHH
LKEQGASDADVARIHAPIGLAIGAVSPSEIAVSIMAEITATLRMPGPSKAAAV
HHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]