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The map label for this gene is yhiI [C]

Identifier: 86750778

GI number: 86750778

Start: 4209944

End: 4210735

Strand: Reverse

Name: yhiI [C]

Synonym: RPB_3668

Alternate gene names: 86750778

Gene position: 4210735-4209944 (Counterclockwise)

Preceding gene: 86750779

Following gene: 86750777

Centisome position: 78.98

GC content: 65.78

Gene sequence:

>792_bases
ATGATCGCGCGCCCGATCCACGCCGCTGCCGCGTTCGCATTGCTGTTCGCGCTCGCCGGCTGTGGTCCGAAGCCAGATCC
AGGCTATCAGGGCTGGGTCGAGGCCGACCTGATTTTCGTCGGCCCGGACGAATCCGGTCGCATTACCCGGCTCACGGTCC
GCGAGGGCGACGAGACCCGCAAGGGCGATCTGATCTACACGCTCGACGACGACCTGCAGCAGGCCGACCTCAACCAGAAT
AATGCGACGCTGGCCAACGCCAGGCAGAGTTTCGATCGCGCGCAATCGCTGTCGAAGACCGGCTCCGGCACGCAGGCCAA
TCTCGATTCCGCGGTCTCGGCGCTGCACGTCGCCGAGGCCCGGGTCGAGACCTCCAAGACCCGGCTGATGCGCCGCCAAA
TCTACGCGCCAGTCACCGGCAATGTGCAGCAGATCTACTTCCGGGAGGGCGAGATGGTGGCGGCGCAGAAGCCCGTGCTG
TCGATCCTGCCGCCCGGCAACATGAAACTGCGGTTCTTCGTGCCGGAGCCGGCCTTGCCGACGCTGGCGATCGGCGACAC
CATTCGCGTGAGTTGCGACAATTGCGCGCCGGATCTCACCGCGAAGATCTACTTCATTGCGACCACGGCGGAGTATACGC
CGCCGGTGATCTACAGCCAGGACGAGCGCAACAAGTTGGTCTATCTGATCCAGGCGCGGCCGGAGCGTCCGGCCAGCCTG
CGCGTCGGTCAGCCGGTCAGCGTGTATCCGACGCCGAAGACCCCGGTTCCGGCTTCCGCGGGTGGCAAGTGA

Upstream 100 bases:

>100_bases
CAGTGATCTGGCAGGGCCTTTTCAATCGCTATTCGCCGTTGGATTCGCTGGGGTTGCTACGTAGTCACATCGCCATCATT
TTCAACGAAGGGAAAGCGAC

Downstream 100 bases:

>100_bases
TGACCGTGGCGGCCCCCGACATTGCCATCGAGGTCAAGGGCCTGACCAAGTCCTTCAACGGCCGCGAGGTGGTGCATGAT
CTGTCGATGCAGGTGAAGCG

Product: putative efflux protein

Products: NA

Alternate protein names: ORF1; Fragment [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIARPIHAAAAFALLFALAGCGPKPDPGYQGWVEADLIFVGPDESGRITRLTVREGDETRKGDLIYTLDDDLQQADLNQN
NATLANARQSFDRAQSLSKTGSGTQANLDSAVSALHVAEARVETSKTRLMRRQIYAPVTGNVQQIYFREGEMVAAQKPVL
SILPPGNMKLRFFVPEPALPTLAIGDTIRVSCDNCAPDLTAKIYFIATTAEYTPPVIYSQDERNKLVYLIQARPERPASL
RVGQPVSVYPTPKTPVPASAGGK

Sequences:

>Translated_263_residues
MIARPIHAAAAFALLFALAGCGPKPDPGYQGWVEADLIFVGPDESGRITRLTVREGDETRKGDLIYTLDDDLQQADLNQN
NATLANARQSFDRAQSLSKTGSGTQANLDSAVSALHVAEARVETSKTRLMRRQIYAPVTGNVQQIYFREGEMVAAQKPVL
SILPPGNMKLRFFVPEPALPTLAIGDTIRVSCDNCAPDLTAKIYFIATTAEYTPPVIYSQDERNKLVYLIQARPERPASL
RVGQPVSVYPTPKTPVPASAGGK
>Mature_263_residues
MIARPIHAAAAFALLFALAGCGPKPDPGYQGWVEADLIFVGPDESGRITRLTVREGDETRKGDLIYTLDDDLQQADLNQN
NATLANARQSFDRAQSLSKTGSGTQANLDSAVSALHVAEARVETSKTRLMRRQIYAPVTGNVQQIYFREGEMVAAQKPVL
SILPPGNMKLRFFVPEPALPTLAIGDTIRVSCDNCAPDLTAKIYFIATTAEYTPPVIYSQDERNKLVYLIQARPERPASL
RVGQPVSVYPTPKTPVPASAGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1789900, Length=299, Percent_Identity=24.0802675585284, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003997
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 28540; Mature: 28540

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARPIHAAAAFALLFALAGCGPKPDPGYQGWVEADLIFVGPDESGRITRLTVREGDETR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCC
KGDLIYTLDDDLQQADLNQNNATLANARQSFDRAQSLSKTGSGTQANLDSAVSALHVAEA
CCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RVETSKTRLMRRQIYAPVTGNVQQIYFREGEMVAAQKPVLSILPPGNMKLRFFVPEPALP
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCEEEEECCCCEEEEEEECCCCCC
TLAIGDTIRVSCDNCAPDLTAKIYFIATTAEYTPPVIYSQDERNKLVYLIQARPERPASL
EEEECCEEEEEECCCCCCCEEEEEEEEEECCCCCCEEECCCCCCEEEEEEEECCCCCCCE
RVGQPVSVYPTPKTPVPASAGGK
ECCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MIARPIHAAAAFALLFALAGCGPKPDPGYQGWVEADLIFVGPDESGRITRLTVREGDETR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCC
KGDLIYTLDDDLQQADLNQNNATLANARQSFDRAQSLSKTGSGTQANLDSAVSALHVAEA
CCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RVETSKTRLMRRQIYAPVTGNVQQIYFREGEMVAAQKPVLSILPPGNMKLRFFVPEPALP
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCEEEEECCCCEEEEEEECCCCCC
TLAIGDTIRVSCDNCAPDLTAKIYFIATTAEYTPPVIYSQDERNKLVYLIQARPERPASL
EEEECCEEEEEECCCCCCCEEEEEEEEEECCCCCCEEECCCCCCEEEEEEEECCCCCCCE
RVGQPVSVYPTPKTPVPASAGGK
ECCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10788346 [H]