| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is caiD [C]
Identifier: 86750708
GI number: 86750708
Start: 4128301
End: 4129113
Strand: Reverse
Name: caiD [C]
Synonym: RPB_3598
Alternate gene names: 86750708
Gene position: 4129113-4128301 (Counterclockwise)
Preceding gene: 86750711
Following gene: 86750707
Centisome position: 77.45
GC content: 68.39
Gene sequence:
>813_bases ATGAATGATCGCGTTGCGGTATCGGTGACGGACGGCGTTGCCGACGTCCGATTGGTGCGGGCGGACAAGATGAATGCGCT CGATGCCGCGATGTTCGAGGCGCTTGTCGCGACCACCGAGCGGCTTTCGCAGGAGAAGGGCGTGCGCGTCGTGGTGCTGT CCGGCGAGGGCAAGGCGTTCTGCGCCGGCCTCGACATGGGGCGTTTTGCCGCGATGAACGAGGGCGGCGGCAACGGCATT CCGGGCGGCGAATTTCGCGATCTCACCAAGCGCACCCATGGCCAGGCCAACGCGCCGCAGCAGGCGGTGTGGGGCTGGCG GATGCTGCCGGTGCCGGTGATCGCCGCGATCCACGGCGTCGCGTTCGGCGGCGGCTTTCAGCTCGCGCTCGGCGCCGACA TCCGGCTGATGGCGCCGGATGCGCGGATGTCGATCATGGAAATCAAATGGGGCCTGGTGCCCGACATGGCCGGCACGCCG GTGCTCGCCTCGCTGGTGCGCGACGACATCCTGCGCGAGCTCACCTACACCGGCCGGATCTTCTCGGCGCAGGAGGCGCT GAGCTACGGCCTCGCGACCAGGATCGTCGACGACCCGCGCAGCGCCGCGCTGGAGATGGCGCGGGAGATCGCCGGCAAGA GCCCGGACGCCATCCGCGCCGCCAAGCGGATGTTCAACAACCTCTCGGTCGACCCCGGCCCTGCGCTGCTCGCCGAAAGC GTCGAACAGCAGAAGCTGATCGGCTCGCCCAACCAGACCGAAGCGGTCCGCGCCAACATGGAAAAGCGCGCGCCCAATTT CGTCGACGGTTAG
Upstream 100 bases:
>100_bases AAAGTGGATGATCGTTGTTGATTAAGCGATTGACTAAATTCCGACAACGCTTTTCTGTAGCGCCGCGAACAGATCACAAC ATATCCAGGGAAACGGCTCG
Downstream 100 bases:
>100_bases TTACACCTTCGGCCGTCATCCTGAGGTGCTCGCCCGCAAGGGCGAGCCTCGAAGGATGCGATACCTGTACCTGCGGCTCA TCCTTCGAGGCTCGCTTCGC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNDRVAVSVTDGVADVRLVRADKMNALDAAMFEALVATTERLSQEKGVRVVVLSGEGKAFCAGLDMGRFAAMNEGGGNGI PGGEFRDLTKRTHGQANAPQQAVWGWRMLPVPVIAAIHGVAFGGGFQLALGADIRLMAPDARMSIMEIKWGLVPDMAGTP VLASLVRDDILRELTYTGRIFSAQEALSYGLATRIVDDPRSAALEMAREIAGKSPDAIRAAKRMFNNLSVDPGPALLAES VEQQKLIGSPNQTEAVRANMEKRAPNFVDG
Sequences:
>Translated_270_residues MNDRVAVSVTDGVADVRLVRADKMNALDAAMFEALVATTERLSQEKGVRVVVLSGEGKAFCAGLDMGRFAAMNEGGGNGI PGGEFRDLTKRTHGQANAPQQAVWGWRMLPVPVIAAIHGVAFGGGFQLALGADIRLMAPDARMSIMEIKWGLVPDMAGTP VLASLVRDDILRELTYTGRIFSAQEALSYGLATRIVDDPRSAALEMAREIAGKSPDAIRAAKRMFNNLSVDPGPALLAES VEQQKLIGSPNQTEAVRANMEKRAPNFVDG >Mature_270_residues MNDRVAVSVTDGVADVRLVRADKMNALDAAMFEALVATTERLSQEKGVRVVVLSGEGKAFCAGLDMGRFAAMNEGGGNGI PGGEFRDLTKRTHGQANAPQQAVWGWRMLPVPVIAAIHGVAFGGGFQLALGADIRLMAPDARMSIMEIKWGLVPDMAGTP VLASLVRDDILRELTYTGRIFSAQEALSYGLATRIVDDPRSAALEMAREIAGKSPDAIRAAKRMFNNLSVDPGPALLAES VEQQKLIGSPNQTEAVRANMEKRAPNFVDG
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=222, Percent_Identity=32.8828828828829, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4502327, Length=264, Percent_Identity=29.1666666666667, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI194097323, Length=266, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI31542718, Length=258, Percent_Identity=26.7441860465116, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI68989263, Length=221, Percent_Identity=26.2443438914027, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI221142681, Length=235, Percent_Identity=31.4893617021277, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787659, Length=265, Percent_Identity=27.9245283018868, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788682, Length=214, Percent_Identity=32.2429906542056, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87082183, Length=279, Percent_Identity=25.4480286738351, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787660, Length=271, Percent_Identity=29.520295202952, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790281, Length=188, Percent_Identity=27.1276595744681, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788597, Length=262, Percent_Identity=25.9541984732824, Blast_Score=68, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17536985, Length=220, Percent_Identity=33.1818181818182, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17540714, Length=240, Percent_Identity=30.8333333333333, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17534483, Length=225, Percent_Identity=29.7777777777778, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI25145438, Length=275, Percent_Identity=28.7272727272727, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17554946, Length=260, Percent_Identity=28.4615384615385, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560910, Length=219, Percent_Identity=27.3972602739726, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17558304, Length=207, Percent_Identity=26.0869565217391, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17508951, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25144276, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508953, Length=221, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24653139, Length=264, Percent_Identity=30.3030303030303, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI19920382, Length=218, Percent_Identity=32.1100917431193, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI20129971, Length=260, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24653477, Length=260, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28803; Mature: 28803
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRVAVSVTDGVADVRLVRADKMNALDAAMFEALVATTERLSQEKGVRVVVLSGEGKAF CCCCEEEEEECCCHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEE CAGLDMGRFAAMNEGGGNGIPGGEFRDLTKRTHGQANAPQQAVWGWRMLPVPVIAAIHGV EECCCCCHHEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHH AFGGGFQLALGADIRLMAPDARMSIMEIKWGLVPDMAGTPVLASLVRDDILRELTYTGRI HCCCCEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH FSAQEALSYGLATRIVDDPRSAALEMAREIAGKSPDAIRAAKRMFNNLSVDPGPALLAES HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH VEQQKLIGSPNQTEAVRANMEKRAPNFVDG HHHHHHCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNDRVAVSVTDGVADVRLVRADKMNALDAAMFEALVATTERLSQEKGVRVVVLSGEGKAF CCCCEEEEEECCCHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEE CAGLDMGRFAAMNEGGGNGIPGGEFRDLTKRTHGQANAPQQAVWGWRMLPVPVIAAIHGV EECCCCCHHEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHH AFGGGFQLALGADIRLMAPDARMSIMEIKWGLVPDMAGTPVLASLVRDDILRELTYTGRI HCCCCEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH FSAQEALSYGLATRIVDDPRSAALEMAREIAGKSPDAIRAAKRMFNNLSVDPGPALLAES HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH VEQQKLIGSPNQTEAVRANMEKRAPNFVDG HHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA