| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750701
Identifier: 86750701
GI number: 86750701
Start: 4116787
End: 4117641
Strand: Reverse
Name: 86750701
Synonym: RPB_3591
Alternate gene names: NA
Gene position: 4117641-4116787 (Counterclockwise)
Preceding gene: 86750702
Following gene: 86750700
Centisome position: 77.23
GC content: 68.07
Gene sequence:
>855_bases ATGGAACAAACTTTGGCGACCGGCGCGCGTGGCGACCTGTCGGGAAAATCCGGTGTGTCGTGGGCCGCGGTGGTGGCAGG CGCCGTCGTGTCTTGCGCACTGACGCTGGTGCTGCTCGCGTTCGGCGCCGGCGTGGGGTTTTCGGTGGTCTCGCCCTGGG GCTCCGAGGGCGTCTCGGCGACGACCTTCAAGATCGGAACCGGTCTGTACTTCATCGTCATCGCGATGATCTCGTCGGCG GTCGGCGGCTATCTGGCCGGCCGGTTGCGCGCGAAATGGGTGGGGATCGATTCCAATGAAATCACATTCCGTGACACCGC GCACGGGCTGCTGGTGTGGGCGTTGGCGACTGTCGTGGGTGCGGCGCTTCTCGCGGCTCCGGCCAGTGCGCTGATCGGCG GCGTCGGCGCTGCGACATCGACCGTCGCCTCGGCCGCGCGATCCTCCGGCGCGATGGACGGTTATGTCGATCAGTTGCTG CGGGCTGGGCCGGCGCCCCAGGCCCAGGGCAATCCATCCGAATCCCGGGGTGAACTCACCCGACTGCTGACGTCGTCGGT CGAGAACGGCGACGGGCTGTCCGCCGGCGATCGCAGCTACGTCGCGAACCTCGTCGCGGCCAGGACCGGCCTCAGCCAGG CCGACGCCGAGCAGCGCGTCGATCAGGTGGTGACCGGCCTGAAGTCCAGCCTCGAGGACGCGCGCCAGGCCGGCCAGCAG CTCTCGATCTGGCTGACCTTGTCGCTGTTCATCGGCGCATTGAGCGCCTGTCTCGCCGCGATGGAAGGCGGCGGCTTGCG CGACGGAACGTGGGGCAAGCAGCCGGTGTTTCGTCGCAACTCGACTGCAACCTAA
Upstream 100 bases:
>100_bases TCACGGTTGTGCTTTCCCGATCGTCTTCGGCGTCTTCCAGGAACCATCCCTCCGCTTCCACATTCTCCCGACGACAGCAC TTTGGCTCGTGGAGAATTCG
Downstream 100 bases:
>100_bases GGAGTGAACCAATGCCGATTCTCTTGTGGCTCGTCGGAATTCCCATTCCTCTCATCCTCCTCATCATGTTTCTGACGTGA TGGAGATTCGAACAGGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MEQTLATGARGDLSGKSGVSWAAVVAGAVVSCALTLVLLAFGAGVGFSVVSPWGSEGVSATTFKIGTGLYFIVIAMISSA VGGYLAGRLRAKWVGIDSNEITFRDTAHGLLVWALATVVGAALLAAPASALIGGVGAATSTVASAARSSGAMDGYVDQLL RAGPAPQAQGNPSESRGELTRLLTSSVENGDGLSAGDRSYVANLVAARTGLSQADAEQRVDQVVTGLKSSLEDARQAGQQ LSIWLTLSLFIGALSACLAAMEGGGLRDGTWGKQPVFRRNSTAT
Sequences:
>Translated_284_residues MEQTLATGARGDLSGKSGVSWAAVVAGAVVSCALTLVLLAFGAGVGFSVVSPWGSEGVSATTFKIGTGLYFIVIAMISSA VGGYLAGRLRAKWVGIDSNEITFRDTAHGLLVWALATVVGAALLAAPASALIGGVGAATSTVASAARSSGAMDGYVDQLL RAGPAPQAQGNPSESRGELTRLLTSSVENGDGLSAGDRSYVANLVAARTGLSQADAEQRVDQVVTGLKSSLEDARQAGQQ LSIWLTLSLFIGALSACLAAMEGGGLRDGTWGKQPVFRRNSTAT >Mature_284_residues MEQTLATGARGDLSGKSGVSWAAVVAGAVVSCALTLVLLAFGAGVGFSVVSPWGSEGVSATTFKIGTGLYFIVIAMISSA VGGYLAGRLRAKWVGIDSNEITFRDTAHGLLVWALATVVGAALLAAPASALIGGVGAATSTVASAARSSGAMDGYVDQLL RAGPAPQAQGNPSESRGELTRLLTSSVENGDGLSAGDRSYVANLVAARTGLSQADAEQRVDQVVTGLKSSLEDARQAGQQ LSIWLTLSLFIGALSACLAAMEGGGLRDGTWGKQPVFRRNSTAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28691; Mature: 28691
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTLATGARGDLSGKSGVSWAAVVAGAVVSCALTLVLLAFGAGVGFSVVSPWGSEGVSA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCE TTFKIGTGLYFIVIAMISSAVGGYLAGRLRAKWVGIDSNEITFRDTAHGLLVWALATVVG EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHH AALLAAPASALIGGVGAATSTVASAARSSGAMDGYVDQLLRAGPAPQAQGNPSESRGELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH RLLTSSVENGDGLSAGDRSYVANLVAARTGLSQADAEQRVDQVVTGLKSSLEDARQAGQQ HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSIWLTLSLFIGALSACLAAMEGGGLRDGTWGKQPVFRRNSTAT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEQTLATGARGDLSGKSGVSWAAVVAGAVVSCALTLVLLAFGAGVGFSVVSPWGSEGVSA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCE TTFKIGTGLYFIVIAMISSAVGGYLAGRLRAKWVGIDSNEITFRDTAHGLLVWALATVVG EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHH AALLAAPASALIGGVGAATSTVASAARSSGAMDGYVDQLLRAGPAPQAQGNPSESRGELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH RLLTSSVENGDGLSAGDRSYVANLVAARTGLSQADAEQRVDQVVTGLKSSLEDARQAGQQ HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSIWLTLSLFIGALSACLAAMEGGGLRDGTWGKQPVFRRNSTAT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA