| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is cyaB [H]
Identifier: 86750678
GI number: 86750678
Start: 4089872
End: 4091452
Strand: Reverse
Name: cyaB [H]
Synonym: RPB_3568
Alternate gene names: 86750678
Gene position: 4091452-4089872 (Counterclockwise)
Preceding gene: 86750680
Following gene: 86750675
Centisome position: 76.74
GC content: 64.83
Gene sequence:
>1581_bases GTGCAGAAAGACCGAGACGACAACGACAAGCTGCGATCGCGCAGCGTGCTGACCGGCTGCCTGATCGCGTTGCTGCTGCT CGCGCTGCCGGTGGCGGTTTGGCTCGACCTCACCCATCTCGCGGACGCGGCGCTGCGGCGGCAGGCCAACGACCTCAATT CGGTGATCACCAGCGTGCGCGGCTACTACGCCAGCAACGTCGTCGGCCGCGTTCTCGCGCATCCCGACAACGTCCAGGTG GTGCATGATTATGAGAGCACGCCCGGCGCCATTCCGATCCCGGCGACGCTGTCCCTCGAACTCGGCAAGGTGATCGGCGC GCAGCAGAGCAACATCACCTATCGGTTCGTTTCCGACTATCCGTTCGCCAATCGCGCGCCGCACCAGCTCGACGGCTTCG AGCGCGAGGCGCTGGCGACGCTGCGCAGGGATGCGTCCGAGAACGTCGTCGCCGGCACCACGGGGCTGCTCAGCGACAGC GTGCGGCTGGTGGCGCCGGTGGTGATGGGGCAGGCCTGCGTCGCCTGCCACAACACGCACCCGGAGAGTCCAAAGCGCGA CTGGAAGGTCGGCGACGTCCGCGGCATCCAGGAGGTGATGATCACCCAGCCGATTGCCGCCAATCTGTTCTCGTTCAAAT TCCTGCTGGCCTATCTGGTGCTCGCGGCGGTGTCGGGCGTGTCGTTCGTCGCGATGCAGCGCCGGCAGGCGCTGAAGATC GTGGCGATGAACAAGGAACTGGAGACCAACAACGACTTCCTCGCCTCGCTGTCGATGAAGATCTCGCGCTATATCCCGCC GCAGATCTACAAGAGCATCTTCTCCGGCCAGAAGGACGTCGTCATCCACACCGAACGCAAGAAGCTGACGATCTTCTTCT CGGACATCCAGAACTTCACCGCGACCACCGAGCGGCTGCAGCCCGAGCTGATCACCCAATTGCTCAACGAGTACTTCACC GAAATGTCGGAGATCGCGCATCGTTACGGCGGCACGATCGATAAATTCATCGGTGACGCGATGCTGATCTTCTTCGGCGA CCCGGACACCAAAGGCGACCGCGCCGACGCGCAGGCCTGCCTGCGGATGGCCTGGGCGATGCAGCGGCGCCTGGCCGAGC TCAACGGCAAATGGCGCGCCGCCGGGATCGAACAGCCGTTCCGCGCGCGGATCGGGATCAATTCCGGCTATTGCAATGTC GGCAATTTCGGCAGCGCGGACCGGATGGACTACACCATCATCGGCGCCGAGGCGAACCTCGCGGCGCGGCTGCAGGCGAT CGCCGAGCCCGGCGGCATCGTCATCAGCTACGAGACCTACGCGCTGGTCAGCGACATCATCGCCGCGCACACGCTGCCGT CGATCACCATGAAGGGCATCAGCCGCGAAGTGGTGCCCTATGCGGTCGATCATCTGCGCGACGGCAGCGAGGCGTCCGAC GTGGTGATCGAAAAGCTGCCGGGCCTGGAGTTCTATCTCGACGCCGCCGCGATGAATCCCGCCGACAGCGACAAAGTCCG CGCCGTGCTGGAGCAGGCGCTGGCGTCGCTGGAACGGAGGGAAGAGAAGGCGGCGGAGTAG
Upstream 100 bases:
>100_bases CGCTGCGGGAAAAAACGGGTAGCTCTGCACCGTTGACGCTTCTCATTGCCCGCCGCCGCCTCTAGTTTGCCGCCGCTGGC AAGGAATGGTGGGACGGCGC
Downstream 100 bases:
>100_bases GTGCGTTTTCGTCCTGGTAGGTCTTGGGGCGATCGAAGGAGATGGATGCGGGTCAAGCCCGCGCATGACGCAGCGTTGCG GTAATTGGCCCTTCAACCGT
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MQKDRDDNDKLRSRSVLTGCLIALLLLALPVAVWLDLTHLADAALRRQANDLNSVITSVRGYYASNVVGRVLAHPDNVQV VHDYESTPGAIPIPATLSLELGKVIGAQQSNITYRFVSDYPFANRAPHQLDGFEREALATLRRDASENVVAGTTGLLSDS VRLVAPVVMGQACVACHNTHPESPKRDWKVGDVRGIQEVMITQPIAANLFSFKFLLAYLVLAAVSGVSFVAMQRRQALKI VAMNKELETNNDFLASLSMKISRYIPPQIYKSIFSGQKDVVIHTERKKLTIFFSDIQNFTATTERLQPELITQLLNEYFT EMSEIAHRYGGTIDKFIGDAMLIFFGDPDTKGDRADAQACLRMAWAMQRRLAELNGKWRAAGIEQPFRARIGINSGYCNV GNFGSADRMDYTIIGAEANLAARLQAIAEPGGIVISYETYALVSDIIAAHTLPSITMKGISREVVPYAVDHLRDGSEASD VVIEKLPGLEFYLDAAAMNPADSDKVRAVLEQALASLERREEKAAE
Sequences:
>Translated_526_residues MQKDRDDNDKLRSRSVLTGCLIALLLLALPVAVWLDLTHLADAALRRQANDLNSVITSVRGYYASNVVGRVLAHPDNVQV VHDYESTPGAIPIPATLSLELGKVIGAQQSNITYRFVSDYPFANRAPHQLDGFEREALATLRRDASENVVAGTTGLLSDS VRLVAPVVMGQACVACHNTHPESPKRDWKVGDVRGIQEVMITQPIAANLFSFKFLLAYLVLAAVSGVSFVAMQRRQALKI VAMNKELETNNDFLASLSMKISRYIPPQIYKSIFSGQKDVVIHTERKKLTIFFSDIQNFTATTERLQPELITQLLNEYFT EMSEIAHRYGGTIDKFIGDAMLIFFGDPDTKGDRADAQACLRMAWAMQRRLAELNGKWRAAGIEQPFRARIGINSGYCNV GNFGSADRMDYTIIGAEANLAARLQAIAEPGGIVISYETYALVSDIIAAHTLPSITMKGISREVVPYAVDHLRDGSEASD VVIEKLPGLEFYLDAAAMNPADSDKVRAVLEQALASLERREEKAAE >Mature_526_residues MQKDRDDNDKLRSRSVLTGCLIALLLLALPVAVWLDLTHLADAALRRQANDLNSVITSVRGYYASNVVGRVLAHPDNVQV VHDYESTPGAIPIPATLSLELGKVIGAQQSNITYRFVSDYPFANRAPHQLDGFEREALATLRRDASENVVAGTTGLLSDS VRLVAPVVMGQACVACHNTHPESPKRDWKVGDVRGIQEVMITQPIAANLFSFKFLLAYLVLAAVSGVSFVAMQRRQALKI VAMNKELETNNDFLASLSMKISRYIPPQIYKSIFSGQKDVVIHTERKKLTIFFSDIQNFTATTERLQPELITQLLNEYFT EMSEIAHRYGGTIDKFIGDAMLIFFGDPDTKGDRADAQACLRMAWAMQRRLAELNGKWRAAGIEQPFRARIGINSGYCNV GNFGSADRMDYTIIGAEANLAARLQAIAEPGGIVISYETYALVSDIIAAHTLPSITMKGISREVVPYAVDHLRDGSEASD VVIEKLPGLEFYLDAAAMNPADSDKVRAVLEQALASLERREEKAAE
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17534659, Length=229, Percent_Identity=26.2008733624454, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI221330468, Length=179, Percent_Identity=29.0502793296089, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI221330470, Length=179, Percent_Identity=29.0502793296089, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 57920; Mature: 57920
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKDRDDNDKLRSRSVLTGCLIALLLLALPVAVWLDLTHLADAALRRQANDLNSVITSVR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYYASNVVGRVLAHPDNVQVVHDYESTPGAIPIPATLSLELGKVIGAQQSNITYRFVSDY HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECHHHHHHHCCCCCCCEEEEECCC PFANRAPHQLDGFEREALATLRRDASENVVAGTTGLLSDSVRLVAPVVMGQACVACHNTH CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHHCCCC PESPKRDWKVGDVRGIQEVMITQPIAANLFSFKFLLAYLVLAAVSGVSFVAMQRRQALKI CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE VAMNKELETNNDFLASLSMKISRYIPPQIYKSIFSGQKDVVIHTERKKLTIFFSDIQNFT EEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHH ATTERLQPELITQLLNEYFTEMSEIAHRYGGTIDKFIGDAMLIFFGDPDTKGDRADAQAC HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCCCCHHHHHHH LRMAWAMQRRLAELNGKWRAAGIEQPFRARIGINSGYCNVGNFGSADRMDYTIIGAEANL HHHHHHHHHHHHHHCCCEEECCCCCCCHHEECCCCCCCCCCCCCCCCCCEEEEEECCCHH AARLQAIAEPGGIVISYETYALVSDIIAAHTLPSITMKGISREVVPYAVDHLRDGSEASD HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCCCCHHH VVIEKLPGLEFYLDAAAMNPADSDKVRAVLEQALASLERREEKAAE HHHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQKDRDDNDKLRSRSVLTGCLIALLLLALPVAVWLDLTHLADAALRRQANDLNSVITSVR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYYASNVVGRVLAHPDNVQVVHDYESTPGAIPIPATLSLELGKVIGAQQSNITYRFVSDY HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECHHHHHHHCCCCCCCEEEEECCC PFANRAPHQLDGFEREALATLRRDASENVVAGTTGLLSDSVRLVAPVVMGQACVACHNTH CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHHCCCC PESPKRDWKVGDVRGIQEVMITQPIAANLFSFKFLLAYLVLAAVSGVSFVAMQRRQALKI CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE VAMNKELETNNDFLASLSMKISRYIPPQIYKSIFSGQKDVVIHTERKKLTIFFSDIQNFT EEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHH ATTERLQPELITQLLNEYFTEMSEIAHRYGGTIDKFIGDAMLIFFGDPDTKGDRADAQAC HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCCCCHHHHHHH LRMAWAMQRRLAELNGKWRAAGIEQPFRARIGINSGYCNVGNFGSADRMDYTIIGAEANL HHHHHHHHHHHHHHCCCEEECCCCCCCHHEECCCCCCCCCCCCCCCCCCEEEEEECCCHH AARLQAIAEPGGIVISYETYALVSDIIAAHTLPSITMKGISREVVPYAVDHLRDGSEASD HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCCCCHHH VVIEKLPGLEFYLDAAAMNPADSDKVRAVLEQALASLERREEKAAE HHHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]