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The map label for this gene is 86750642

Identifier: 86750642

GI number: 86750642

Start: 4042224

End: 4044602

Strand: Reverse

Name: 86750642

Synonym: RPB_3532

Alternate gene names: NA

Gene position: 4044602-4042224 (Counterclockwise)

Preceding gene: 86750655

Following gene: 86750639

Centisome position: 75.86

GC content: 50.36

Gene sequence:

>2379_bases
ATGCCAATACCCACCAACTTTGACCCATCGAGTTCAGTTCTATTCCTCGGTTCGGGATTTAGCGCAAGTGGGACGGCAAT
CTATGGCGGACATCCACCGGCAGGAGACCAATTGTGCGACCTGTTGGCGGACGAACTGAAAGTGGCTCGCGGGAAATACG
ATTTGCAGGCGCTCGCAGACGCCTTTCGCAGGCGACCTGAGCTGAATATGTATCAATCACTGCGTCGGCTATTTACGATA
AGCAATCTGAGCGTCGATCAGCGCGAAATTTTGAAGCTTCGCTGGCAACGAATTTATACGACGAACTACGATGATAGTGT
AGAACTGGCGTTTCATGAGAACGGCATCAAGTCGCCTTCTTACAACTACGACGACCCGAAGCCCGCACGCGTTCCACGCG
GTGCTGTGATTCACCTTCACGGTGTGATCAAGAAAGCCACCGAAGAGAATATTCACCAACAGCTCGTGCTCGGGCGGCAG
TCCTATATAAGGCAATTCTTTGCGAAATCTCCTTGGTATGATGAATTCTTGCGAGACATAAGATTTTGCGAAGCCATTTT
TTTTGTTGGCTACAGCCTTGCTGATCCACACGTCACAGCTCTTTTCGTTAATCCCGAGCAGTCCAAACTCCGGACTTATT
TCGTGCTTCGACCGCCTCTGGACTCCCTATTGGTGGAGCACATCGAGGAGTATGGAGAAGCCCATCCGATAGAAACGAAA
GGGTTTGCTCAGATATGTCGGTCGCTTAGCGCGCCACCGCCGCTTGCAGACCTAAATAATCTCCGAATTCTTCGTTGGAT
CGATCCATTCAAAGATCAAAAGACAGTAATTCAACCGACCTCGCTGGAGGTAATCAACTTAGTGGCCTTCGGTGCTTTTG
ACTCACAGCGTGCTTTATCAACTCTGCCCAATGGGAAGTATGTAATACCTCGCCAGAAGATGGCGCGGCGGGCTGTTCAG
CAAGTGGTACAAAATCGCACGACGCTTCTTCATGGCCGCCTGGGAAATGGGAAATCTATATTCCTTTGGATACTCGCCTT
TCATCTGATGGCTCTAGATTATCAATGTTTCCGATGCAGTGCCATGTCGCCAGCCATTGACCGCGAGGCTAAAGCGCTAG
TGGATCATCCAAAAGTGGCGATTCTATTTGACAGTTATGATGTTGCGATTGATTCCGTCGATCGCCTGTATGAGCTTTTG
CCGCACGCGCGATTTATAGTTTGCGTGCGGAGCGGCGTTCAGGACGTTAGGCTGCACGAAATTGCAACGCGGTTTCCGTC
GTCGATTGCGCGCGTGAATCTCAATGAGTTTGATGCCGAAGATCGTTCGGACTTCATTGATCTCTTGGTGCCGGCCGGAG
CTCTTAAGGACGATCTTGAAAATAGGATACGCAGTTGTGCCGACATCCGTGAAGTCGTTGCCACGATCTACGAGAACGAA
TTCATTCAGCGTCGGATTCGAGAATCGCTAGCTCCGCTGCGCTCTGATCGATCTGCTGCAGCGGTCACCATTCTGGGATT
GCTGTTATCTTGGATCAATCAGACTGGTGATCCATCGTTATATCTTGAAGCGCTCGATGCGGACCCGCACACCACGCTTG
CAAAATACCGAGAGGTCGCCATCGATATTTTTCGGCTTGACGATGATCAGATTCAAGCAAGATCGCCGGTGTTTTCGGAT
TACATTCTCCGTCGTCTTTTCTCGGTTGATGAGATATTCCCCGTTGTCGAGAAGGTATTGATCGCGGCCGTTCAGCGCAA
AAAGGAAAGAAAATACCGTGCGATACTAAGTAATATAATGCGTTACTCAGCGCTCTTGAGCTTGTCCAAAGAGGCTCCCG
ATGGCGCGAACAAGATCATTGGTTTGTATGGCCGACTGCAGCGAGATGTCGGCATTCAAGAGGAGCCGCTGTTTTGGTTG
CAGTACGCAATCGCTATGACTGAAGCGGATTCAGCCGAAATTGCGGAAGGTTTTCTTAGGACGGCGTACCGCAAGGCCGC
CGAAGCTGGAGATTTTGCGACCTATCAGTTGGACACTTTTGCCCTTCGCCTGTATTTGAAGCTGGAGGAAAAGGCTGAAG
TGGGTAGGTCTGTAAGCCGTATTAAGATGATTCTGTACTCGACTAAATTAGTTTCGGGAATGATTGGTGATCAAAACCAT
CGGGCTTATGCAGTAAGAGTCCTAGAGGGCTGGTTGCCGTTTGTCGCTTCAAGGGTTGCGGATCTCACCGGTTCGCAGAA
AACGAAGTGCTTGGCTGCGGTGGACGATCTGTTGCATAAGATTTCGGGGCTGAGCGCTGCAGTTAGAGCGGAGACAGGAT
CTGACCAAGTTAAGTCCGACCTTGAAGCTGCTAAGCGAACGTTGCTGCTCGGAGCATAG

Upstream 100 bases:

>100_bases
GACCACGTTTGTCTCATCAGGCCGCTCGAAATGCATCCCTTAGTCGTGCTAATCTTGATTCTGCTACCGTCGCTCAAACC
CCTCGGCCGGAAGTTTTGCT

Downstream 100 bases:

>100_bases
TTGCAGGGTCGGCCTTGGGTCAATTGGCGATAAAGTGTCCTACCGAAACCGAGGTGTCGTCCGCTATTTGCTGAACGCAA
AAGACGATTCAAATGATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 792; Mature: 791

Protein sequence:

>792_residues
MPIPTNFDPSSSVLFLGSGFSASGTAIYGGHPPAGDQLCDLLADELKVARGKYDLQALADAFRRRPELNMYQSLRRLFTI
SNLSVDQREILKLRWQRIYTTNYDDSVELAFHENGIKSPSYNYDDPKPARVPRGAVIHLHGVIKKATEENIHQQLVLGRQ
SYIRQFFAKSPWYDEFLRDIRFCEAIFFVGYSLADPHVTALFVNPEQSKLRTYFVLRPPLDSLLVEHIEEYGEAHPIETK
GFAQICRSLSAPPPLADLNNLRILRWIDPFKDQKTVIQPTSLEVINLVAFGAFDSQRALSTLPNGKYVIPRQKMARRAVQ
QVVQNRTTLLHGRLGNGKSIFLWILAFHLMALDYQCFRCSAMSPAIDREAKALVDHPKVAILFDSYDVAIDSVDRLYELL
PHARFIVCVRSGVQDVRLHEIATRFPSSIARVNLNEFDAEDRSDFIDLLVPAGALKDDLENRIRSCADIREVVATIYENE
FIQRRIRESLAPLRSDRSAAAVTILGLLLSWINQTGDPSLYLEALDADPHTTLAKYREVAIDIFRLDDDQIQARSPVFSD
YILRRLFSVDEIFPVVEKVLIAAVQRKKERKYRAILSNIMRYSALLSLSKEAPDGANKIIGLYGRLQRDVGIQEEPLFWL
QYAIAMTEADSAEIAEGFLRTAYRKAAEAGDFATYQLDTFALRLYLKLEEKAEVGRSVSRIKMILYSTKLVSGMIGDQNH
RAYAVRVLEGWLPFVASRVADLTGSQKTKCLAAVDDLLHKISGLSAAVRAETGSDQVKSDLEAAKRTLLLGA

Sequences:

>Translated_792_residues
MPIPTNFDPSSSVLFLGSGFSASGTAIYGGHPPAGDQLCDLLADELKVARGKYDLQALADAFRRRPELNMYQSLRRLFTI
SNLSVDQREILKLRWQRIYTTNYDDSVELAFHENGIKSPSYNYDDPKPARVPRGAVIHLHGVIKKATEENIHQQLVLGRQ
SYIRQFFAKSPWYDEFLRDIRFCEAIFFVGYSLADPHVTALFVNPEQSKLRTYFVLRPPLDSLLVEHIEEYGEAHPIETK
GFAQICRSLSAPPPLADLNNLRILRWIDPFKDQKTVIQPTSLEVINLVAFGAFDSQRALSTLPNGKYVIPRQKMARRAVQ
QVVQNRTTLLHGRLGNGKSIFLWILAFHLMALDYQCFRCSAMSPAIDREAKALVDHPKVAILFDSYDVAIDSVDRLYELL
PHARFIVCVRSGVQDVRLHEIATRFPSSIARVNLNEFDAEDRSDFIDLLVPAGALKDDLENRIRSCADIREVVATIYENE
FIQRRIRESLAPLRSDRSAAAVTILGLLLSWINQTGDPSLYLEALDADPHTTLAKYREVAIDIFRLDDDQIQARSPVFSD
YILRRLFSVDEIFPVVEKVLIAAVQRKKERKYRAILSNIMRYSALLSLSKEAPDGANKIIGLYGRLQRDVGIQEEPLFWL
QYAIAMTEADSAEIAEGFLRTAYRKAAEAGDFATYQLDTFALRLYLKLEEKAEVGRSVSRIKMILYSTKLVSGMIGDQNH
RAYAVRVLEGWLPFVASRVADLTGSQKTKCLAAVDDLLHKISGLSAAVRAETGSDQVKSDLEAAKRTLLLGA
>Mature_791_residues
PIPTNFDPSSSVLFLGSGFSASGTAIYGGHPPAGDQLCDLLADELKVARGKYDLQALADAFRRRPELNMYQSLRRLFTIS
NLSVDQREILKLRWQRIYTTNYDDSVELAFHENGIKSPSYNYDDPKPARVPRGAVIHLHGVIKKATEENIHQQLVLGRQS
YIRQFFAKSPWYDEFLRDIRFCEAIFFVGYSLADPHVTALFVNPEQSKLRTYFVLRPPLDSLLVEHIEEYGEAHPIETKG
FAQICRSLSAPPPLADLNNLRILRWIDPFKDQKTVIQPTSLEVINLVAFGAFDSQRALSTLPNGKYVIPRQKMARRAVQQ
VVQNRTTLLHGRLGNGKSIFLWILAFHLMALDYQCFRCSAMSPAIDREAKALVDHPKVAILFDSYDVAIDSVDRLYELLP
HARFIVCVRSGVQDVRLHEIATRFPSSIARVNLNEFDAEDRSDFIDLLVPAGALKDDLENRIRSCADIREVVATIYENEF
IQRRIRESLAPLRSDRSAAAVTILGLLLSWINQTGDPSLYLEALDADPHTTLAKYREVAIDIFRLDDDQIQARSPVFSDY
ILRRLFSVDEIFPVVEKVLIAAVQRKKERKYRAILSNIMRYSALLSLSKEAPDGANKIIGLYGRLQRDVGIQEEPLFWLQ
YAIAMTEADSAEIAEGFLRTAYRKAAEAGDFATYQLDTFALRLYLKLEEKAEVGRSVSRIKMILYSTKLVSGMIGDQNHR
AYAVRVLEGWLPFVASRVADLTGSQKTKCLAAVDDLLHKISGLSAAVRAETGSDQVKSDLEAAKRTLLLGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89362; Mature: 89230

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPTNFDPSSSVLFLGSGFSASGTAIYGGHPPAGDQLCDLLADELKVARGKYDLQALAD
CCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
AFRRRPELNMYQSLRRLFTISNLSVDQREILKLRWQRIYTTNYDDSVELAFHENGIKSPS
HHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCC
YNYDDPKPARVPRGAVIHLHGVIKKATEENIHQQLVLGRQSYIRQFFAKSPWYDEFLRDI
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFCEAIFFVGYSLADPHVTALFVNPEQSKLRTYFVLRPPLDSLLVEHIEEYGEAHPIETK
HHHHHHHHHHHHCCCCCEEEEEECCCHHCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCH
GFAQICRSLSAPPPLADLNNLRILRWIDPFKDQKTVIQPTSLEVINLVAFGAFDSQRALS
HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHHCCCCCCHHHHH
TLPNGKYVIPRQKMARRAVQQVVQNRTTLLHGRLGNGKSIFLWILAFHLMALDYQCFRCS
HCCCCCEECCHHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
AMSPAIDREAKALVDHPKVAILFDSYDVAIDSVDRLYELLPHARFIVCVRSGVQDVRLHE
CCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHEEHHHHCCCHHHHHHH
IATRFPSSIARVNLNEFDAEDRSDFIDLLVPAGALKDDLENRIRSCADIREVVATIYENE
HHHHCCHHHHCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIQRRIRESLAPLRSDRSAAAVTILGLLLSWINQTGDPSLYLEALDADPHTTLAKYREVA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHH
IDIFRLDDDQIQARSPVFSDYILRRLFSVDEIFPVVEKVLIAAVQRKKERKYRAILSNIM
HHEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYSALLSLSKEAPDGANKIIGLYGRLQRDVGIQEEPLFWLQYAIAMTEADSAEIAEGFLR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
TAYRKAAEAGDFATYQLDTFALRLYLKLEEKAEVGRSVSRIKMILYSTKLVSGMIGDQNH
HHHHHHHCCCCCEEEEHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RAYAVRVLEGWLPFVASRVADLTGSQKTKCLAAVDDLLHKISGLSAAVRAETGSDQVKSD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHH
LEAAKRTLLLGA
HHHHHHHHHCCC
>Mature Secondary Structure 
PIPTNFDPSSSVLFLGSGFSASGTAIYGGHPPAGDQLCDLLADELKVARGKYDLQALAD
CCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
AFRRRPELNMYQSLRRLFTISNLSVDQREILKLRWQRIYTTNYDDSVELAFHENGIKSPS
HHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCC
YNYDDPKPARVPRGAVIHLHGVIKKATEENIHQQLVLGRQSYIRQFFAKSPWYDEFLRDI
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFCEAIFFVGYSLADPHVTALFVNPEQSKLRTYFVLRPPLDSLLVEHIEEYGEAHPIETK
HHHHHHHHHHHHCCCCCEEEEEECCCHHCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCH
GFAQICRSLSAPPPLADLNNLRILRWIDPFKDQKTVIQPTSLEVINLVAFGAFDSQRALS
HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHHCCCCCCHHHHH
TLPNGKYVIPRQKMARRAVQQVVQNRTTLLHGRLGNGKSIFLWILAFHLMALDYQCFRCS
HCCCCCEECCHHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
AMSPAIDREAKALVDHPKVAILFDSYDVAIDSVDRLYELLPHARFIVCVRSGVQDVRLHE
CCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHEEHHHHCCCHHHHHHH
IATRFPSSIARVNLNEFDAEDRSDFIDLLVPAGALKDDLENRIRSCADIREVVATIYENE
HHHHCCHHHHCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIQRRIRESLAPLRSDRSAAAVTILGLLLSWINQTGDPSLYLEALDADPHTTLAKYREVA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHH
IDIFRLDDDQIQARSPVFSDYILRRLFSVDEIFPVVEKVLIAAVQRKKERKYRAILSNIM
HHEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYSALLSLSKEAPDGANKIIGLYGRLQRDVGIQEEPLFWLQYAIAMTEADSAEIAEGFLR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
TAYRKAAEAGDFATYQLDTFALRLYLKLEEKAEVGRSVSRIKMILYSTKLVSGMIGDQNH
HHHHHHHCCCCCEEEEHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RAYAVRVLEGWLPFVASRVADLTGSQKTKCLAAVDDLLHKISGLSAAVRAETGSDQVKSD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHH
LEAAKRTLLLGA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA