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The map label for this gene is bdlA [H]

Identifier: 86750632

GI number: 86750632

Start: 4030345

End: 4031760

Strand: Direct

Name: bdlA [H]

Synonym: RPB_3522

Alternate gene names: 86750632

Gene position: 4030345-4031760 (Clockwise)

Preceding gene: 86750631

Following gene: 86750640

Centisome position: 75.59

GC content: 68.22

Gene sequence:

>1416_bases
ATGCGAGGTCCCATGTCGATTCTATCGGTTGCACGCAAGGCGTTGCGCGACGGCAGCGACGAAACCTCGACCGGCGCGGC
GACACCGGCCGCTGACCTGGTAAACATACGAGCCCGCGACGACGCGATCGCCGCCTGTCTGCGCCGGATCGCCGAAGGCG
ATTACGAGGTCGTGCTGCCGGCGGGCGACGATCCGCTGTCGCAGGCGGTCGGCGCGCTGTTGCAGCGGCTGTCGGGCAAC
GCCTCCCGCAATCTCGACCGCATGGTCGACCTCAGCATCCAGGGCAGCGAGACGGCGATGTCGTCCGCTTATTTGCTGTC
GTCGACCCGCGAGATCGACCAGCGCACCCAGGCGCTGGCGAGCGCGAGCGAGGAGATGGTGGCGTCGATCGGCCAGATCC
GCGCCACCGCCCAGGCCGCTGCGACCGAAGCGACCGAGATGCAGATCAGCGCTGATCGCGGCATGACGACGGCGAACTCG
GCCTCCGCCGCGATGGGGCGGGTCAGCACCACCGCCGAGCTGGCCTCGGCGAAGATCACCGCGCTCAGCGAAGCCTCCGA
AGCGATCGGCAGCATCGTCGGGTCGATCGACGCCATCGCCCGGCAGACCAACCTGCTGGCGCTCAACGCCACCATCGAGG
CGGCGCGCGCCGGCGAGGCCGGCCGCGGCTTCGCCGTGGTCGCCACCGAGGTCAAGAGCCTGTCGCAGCAGACCTCGAAC
GCGACCGTCGACATCCGCAGCCGGATCGACCGGCTGCGCGAGGACATCGCCACGATCGTCGCCGCGATGGCGGACTGCAC
CGGCGCCGCGGTCGAAAGCCGCGAGGTGGTCAACACGCTGGGCGAAGCGATGGCCGGCGTGTCCCGGCGCGTCACCGGCG
TCACCGACGGCATGTCGGAGATCGCCACCATCCTCAATCAGCAATCCGAAGCCTCGCGCGAGATCGCGACCGGCATTTCG
GCGATCGCCGAGATGACCAAGAACAGCGTCGGCCAGGTCGGCGACATCTCCGACCAGCTCGATCACGTGCAGTCGCTGGT
CGATAGCGAATTGTCGGAACTGTCGCGCATGACGTTCGACGGTCTGATCGAGCGCCTCGCCAAGGCCGATCACATCACCT
GGAAGAAGAAGCTCTGCGACATGGCGGTGGGCCGCGCCAAGCTCAACGCCGACGAACTCACCGACCACCATTCCTGCCGG
CTCGGCAAATGGTACTACGGCGACGGCTCGCTGCAGTCGCGCAACGCCCCGGCCTTCCGGGCGCTGGAGAAACCGCACGC
GCTGGTGCACGATCACGGCAAGAAGGCCGCGCGGCTGTTCCAGTCGGGCGACCTCGCCGGCGCGATCGCCGAGATCGAAT
GCGTCGGCGACGCATCCAAGGACGTGCTGCGGCTGCTCGACGACCTGGTCAAGTAA

Upstream 100 bases:

>100_bases
AATTCGACGCGTATCACCGGTATTCGCGCCGAGCGCGCGCGCTTCCCAACTAACAATTAACACGTGCGATTCATTGTGCG
GACGAATTCGATGCACCCCG

Downstream 100 bases:

>100_bases
CAGCACTCGAGCAGTACTGCGGCTGGAGCAACTTTGCTTTCGATGGAGTCAGACCCGGCTGCCGCCGTCATCCTGAGGTG
CCCGCTGGGCCGCGCTGTGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MRGPMSILSVARKALRDGSDETSTGAATPAADLVNIRARDDAIAACLRRIAEGDYEVVLPAGDDPLSQAVGALLQRLSGN
ASRNLDRMVDLSIQGSETAMSSAYLLSSTREIDQRTQALASASEEMVASIGQIRATAQAAATEATEMQISADRGMTTANS
ASAAMGRVSTTAELASAKITALSEASEAIGSIVGSIDAIARQTNLLALNATIEAARAGEAGRGFAVVATEVKSLSQQTSN
ATVDIRSRIDRLREDIATIVAAMADCTGAAVESREVVNTLGEAMAGVSRRVTGVTDGMSEIATILNQQSEASREIATGIS
AIAEMTKNSVGQVGDISDQLDHVQSLVDSELSELSRMTFDGLIERLAKADHITWKKKLCDMAVGRAKLNADELTDHHSCR
LGKWYYGDGSLQSRNAPAFRALEKPHALVHDHGKKAARLFQSGDLAGAIAEIECVGDASKDVLRLLDDLVK

Sequences:

>Translated_471_residues
MRGPMSILSVARKALRDGSDETSTGAATPAADLVNIRARDDAIAACLRRIAEGDYEVVLPAGDDPLSQAVGALLQRLSGN
ASRNLDRMVDLSIQGSETAMSSAYLLSSTREIDQRTQALASASEEMVASIGQIRATAQAAATEATEMQISADRGMTTANS
ASAAMGRVSTTAELASAKITALSEASEAIGSIVGSIDAIARQTNLLALNATIEAARAGEAGRGFAVVATEVKSLSQQTSN
ATVDIRSRIDRLREDIATIVAAMADCTGAAVESREVVNTLGEAMAGVSRRVTGVTDGMSEIATILNQQSEASREIATGIS
AIAEMTKNSVGQVGDISDQLDHVQSLVDSELSELSRMTFDGLIERLAKADHITWKKKLCDMAVGRAKLNADELTDHHSCR
LGKWYYGDGSLQSRNAPAFRALEKPHALVHDHGKKAARLFQSGDLAGAIAEIECVGDASKDVLRLLDDLVK
>Mature_471_residues
MRGPMSILSVARKALRDGSDETSTGAATPAADLVNIRARDDAIAACLRRIAEGDYEVVLPAGDDPLSQAVGALLQRLSGN
ASRNLDRMVDLSIQGSETAMSSAYLLSSTREIDQRTQALASASEEMVASIGQIRATAQAAATEATEMQISADRGMTTANS
ASAAMGRVSTTAELASAKITALSEASEAIGSIVGSIDAIARQTNLLALNATIEAARAGEAGRGFAVVATEVKSLSQQTSN
ATVDIRSRIDRLREDIATIVAAMADCTGAAVESREVVNTLGEAMAGVSRRVTGVTDGMSEIATILNQQSEASREIATGIS
AIAEMTKNSVGQVGDISDQLDHVQSLVDSELSELSRMTFDGLIERLAKADHITWKKKLCDMAVGRAKLNADELTDHHSCR
LGKWYYGDGSLQSRNAPAFRALEKPHALVHDHGKKAARLFQSGDLAGAIAEIECVGDASKDVLRLLDDLVK

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=233, Percent_Identity=36.480686695279, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI2367378, Length=228, Percent_Identity=34.6491228070175, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788194, Length=245, Percent_Identity=30.6122448979592, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=161, Percent_Identity=37.888198757764, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787690, Length=299, Percent_Identity=31.438127090301, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 49526; Mature: 49526

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPMSILSVARKALRDGSDETSTGAATPAADLVNIRARDDAIAACLRRIAEGDYEVVLP
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHCCCCEEEEE
AGDDPLSQAVGALLQRLSGNASRNLDRMVDLSIQGSETAMSSAYLLSSTREIDQRTQALA
CCCCHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
SASEEMVASIGQIRATAQAAATEATEMQISADRGMTTANSASAAMGRVSTTAELASAKIT
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALSEASEAIGSIVGSIDAIARQTNLLALNATIEAARAGEAGRGFAVVATEVKSLSQQTSN
HHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
ATVDIRSRIDRLREDIATIVAAMADCTGAAVESREVVNTLGEAMAGVSRRVTGVTDGMSE
CEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IATILNQQSEASREIATGISAIAEMTKNSVGQVGDISDQLDHVQSLVDSELSELSRMTFD
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLIERLAKADHITWKKKLCDMAVGRAKLNADELTDHHSCRLGKWYYGDGSLQSRNAPAFR
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCCCCCCCCCHHHH
ALEKPHALVHDHGKKAARLFQSGDLAGAIAEIECVGDASKDVLRLLDDLVK
HHHCCHHHHHHCCHHHHHHHHCCCCHHHHHHEEECCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MRGPMSILSVARKALRDGSDETSTGAATPAADLVNIRARDDAIAACLRRIAEGDYEVVLP
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHCCCCEEEEE
AGDDPLSQAVGALLQRLSGNASRNLDRMVDLSIQGSETAMSSAYLLSSTREIDQRTQALA
CCCCHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
SASEEMVASIGQIRATAQAAATEATEMQISADRGMTTANSASAAMGRVSTTAELASAKIT
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALSEASEAIGSIVGSIDAIARQTNLLALNATIEAARAGEAGRGFAVVATEVKSLSQQTSN
HHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
ATVDIRSRIDRLREDIATIVAAMADCTGAAVESREVVNTLGEAMAGVSRRVTGVTDGMSE
CEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IATILNQQSEASREIATGISAIAEMTKNSVGQVGDISDQLDHVQSLVDSELSELSRMTFD
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLIERLAKADHITWKKKLCDMAVGRAKLNADELTDHHSCRLGKWYYGDGSLQSRNAPAFR
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCCCCCCCCCHHHH
ALEKPHALVHDHGKKAARLFQSGDLAGAIAEIECVGDASKDVLRLLDDLVK
HHHCCHHHHHHCCHHHHHHHHCCCCHHHHHHEEECCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]