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The map label for this gene is 86750629

Identifier: 86750629

GI number: 86750629

Start: 4027516

End: 4027935

Strand: Reverse

Name: 86750629

Synonym: RPB_3519

Alternate gene names: NA

Gene position: 4027935-4027516 (Counterclockwise)

Preceding gene: 86750630

Following gene: 86750628

Centisome position: 75.55

GC content: 66.67

Gene sequence:

>420_bases
ATGAGCGACGCCGCGGGCAAGAGCCTGATCGAACTGACCGCGACCATCGTGTCGGCCTATGTCAGCAACAATCCGACGCC
GGCGGGCGAGGTCCCGAGCCTGCTCGGGCAGGTGCACGCCGCCCTGCAGCGGCTGTCGAGCGGCCGCGCCGAAGCGCCGG
CGCTGGAGCCGGCCAAGCCGGCGGTTCCGCTGAAGAAGTCGATGACGCCGGAATATCTGATCTGCCTCGAGGACGGCAAA
CGCTTCAAATCGCTGAAGCGGCATCTGCGCACCCAGTACAAGATGACCCCCGAGCAATATCGCGAGAAATGGGGCCTGCC
GTCGGACTACCCGATGGTCGCGCCGAATTACGCGGTCGAGCGCTCGCAACTCGCCAAGAAGATGGGCCTCGGCCAGCAGC
GCCGCCGGCGCAGCAAGTAG

Upstream 100 bases:

>100_bases
TTGCACGCGGCCTGCCGAACATCGCCGAGCAACCGAGATTCGACGGGCGTGGCGCGCGGAACCTCCGCCGCCGGCCTTCA
GCCGATTGGACGATCCTTCC

Downstream 100 bases:

>100_bases
GCGGGTGAGGGGCTCTGCCCCACCCTCCCCTGGAGGGGGAGGGTCGCTCGCTCAGCGAGCGGGGTGGGGTGGCGAAGAGT
TCATCCGCCGTGCCCGCTTC

Product: MucR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSDAAGKSLIELTATIVSAYVSNNPTPAGEVPSLLGQVHAALQRLSSGRAEAPALEPAKPAVPLKKSMTPEYLICLEDGK
RFKSLKRHLRTQYKMTPEQYREKWGLPSDYPMVAPNYAVERSQLAKKMGLGQQRRRRSK

Sequences:

>Translated_139_residues
MSDAAGKSLIELTATIVSAYVSNNPTPAGEVPSLLGQVHAALQRLSSGRAEAPALEPAKPAVPLKKSMTPEYLICLEDGK
RFKSLKRHLRTQYKMTPEQYREKWGLPSDYPMVAPNYAVERSQLAKKMGLGQQRRRRSK
>Mature_138_residues
SDAAGKSLIELTATIVSAYVSNNPTPAGEVPSLLGQVHAALQRLSSGRAEAPALEPAKPAVPLKKSMTPEYLICLEDGKR
FKSLKRHLRTQYKMTPEQYREKWGLPSDYPMVAPNYAVERSQLAKKMGLGQQRRRRSK

Specific function: Unknown

COG id: COG4957

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ros/mucR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008807 [H]

Pfam domain/function: PF05443 ROS_MUCR [H]

EC number: NA

Molecular weight: Translated: 15437; Mature: 15306

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAAGKSLIELTATIVSAYVSNNPTPAGEVPSLLGQVHAALQRLSSGRAEAPALEPAKP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
AVPLKKSMTPEYLICLEDGKRFKSLKRHLRTQYKMTPEQYREKWGLPSDYPMVAPNYAVE
CCCCHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHH
RSQLAKKMGLGQQRRRRSK
HHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
SDAAGKSLIELTATIVSAYVSNNPTPAGEVPSLLGQVHAALQRLSSGRAEAPALEPAKP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
AVPLKKSMTPEYLICLEDGKRFKSLKRHLRTQYKMTPEQYREKWGLPSDYPMVAPNYAVE
CCCCHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHH
RSQLAKKMGLGQQRRRRSK
HHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]